Pairwise Alignments

Query, 247 a.a., putative Glycine betaine/carnitine/choline ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 282 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score = 93.2 bits (230), Expect = 5e-24
 Identities = 61/232 (26%), Positives = 105/232 (45%), Gaps = 5/232 (2%)

Query: 8   SPPVAKRYGKGLLGWAAVLVILALLVHWIGIDTIARYRDDLGFYLQAHLVLVLASMAAAL 67
           +PPV       LLGW  + +   +L    G+  +      L     + L LV  +   AL
Sbjct: 50  APPVVIALIAALLGWRLINLAAGILA---GVALLFCATMGLWAETMSTLALVTTATILAL 106

Query: 68  AVGIPAGIALSRPHRVDKAERFMQFFNVGNTIPPLAVLAIALSILGIGAGPAIFALFLAS 127
            VGIP GI       +D+        ++  T+PP   L  A+++LG G   A+ A F+ +
Sbjct: 107 LVGIPLGIIAGFTKSLDRV--LEPILDLIQTMPPYIYLLPAIALLGYGPATALIATFIVA 164

Query: 128 LLPIVRNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVPIIVGGVRVALALNVGT 187
           + P +R T  G++  P    E     G+TP Q   ++ LP A+P ++ G+  +L +  G 
Sbjct: 165 MPPAIRLTSLGIRMTPREFIELGHASGLTPWQMFMKIRLPFAIPSVMAGINQSLMMAFGM 224

Query: 188 APLAFLIGANSLGSLIFPGIALNNQPQLLLGAACTALLALVLDAAVSFSSRR 239
             +A ++G+  LG  I+  +   +    +  A    +L +VLD     ++ R
Sbjct: 225 VVIAGIVGSGGLGETIYGAVRTLDIATSINAAIAIVILTMVLDRLTQSATSR 276