Pairwise Alignments

Query, 247 a.a., putative Glycine betaine/carnitine/choline ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 343 a.a., ABC transporter, membrane spanning protein (proline/glycine betaine) from Agrobacterium fabrum C58

 Score = 89.7 bits (221), Expect = 7e-23
 Identities = 58/175 (33%), Positives = 88/175 (50%), Gaps = 2/175 (1%)

Query: 56  LVLVLASMAAALAVGIPAGIALSRPHRVDKAERFMQFFNVGNTIPPLAVLAIALSILGIG 115
           L LV+A+ A  + +GIP GI  +R   +    R     ++  TIP    L  AL + G+G
Sbjct: 159 LALVIAASAVCMIIGIPLGILAARRKWIYAGMR--PALDLMQTIPTFVYLIPALVLFGLG 216

Query: 116 AGPAIFALFLASLLPIVRNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVPIIVG 175
             P + A  + ++   VR T  G+ + P +L EAA   G TP Q L +VELP A P I+ 
Sbjct: 217 MVPGLIATVIFAIPAPVRLTRLGIVSTPPALVEAAVAFGATPSQVLRKVELPFAAPQIMA 276

Query: 176 GVRVALALNVGTAPLAFLIGANSLGSLIFPGIALNNQPQLLLGAACTALLALVLD 230
           G+   + L++    ++ L+GAN LG  +   +   N         C  +LA+VLD
Sbjct: 277 GLTQTIMLSLSMVVISALVGANGLGVPVVRALNTVNIAMGFEAGLCIVILAIVLD 331