Pairwise Alignments

Query, 247 a.a., putative Glycine betaine/carnitine/choline ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 246 a.a., ABC transporter, membrane spanning protein (proline/glycine/betaine) from Agrobacterium fabrum C58

 Score =  127 bits (320), Expect = 2e-34
 Identities = 68/185 (36%), Positives = 105/185 (56%)

Query: 54  AHLVLVLASMAAALAVGIPAGIALSRPHRVDKAERFMQFFNVGNTIPPLAVLAIALSILG 113
           +HL +V  +   A        + ++RP   D         N+G T PP+AVLA+A+ ++G
Sbjct: 54  SHLTIVAIATGLATLTAGALAVLVTRPFGADFLPLSRSIVNIGQTFPPVAVLALAVPMIG 113

Query: 114 IGAGPAIFALFLASLLPIVRNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVPII 173
            G  P + ALFL +LLP+  NT  GL  +PA++ +AA G GMT  Q+L +VELP A+P I
Sbjct: 114 FGEKPTLIALFLYALLPVFENTLTGLTTLPATVMDAARGSGMTGWQRLTKVELPLALPAI 173

Query: 174 VGGVRVALALNVGTAPLAFLIGANSLGSLIFPGIALNNQPQLLLGAACTALLALVLDAAV 233
           + GVR++  +++ TA +   + A +LG +I  G+  NN   +L G    A LA+++ A  
Sbjct: 174 LAGVRLSAVISLSTATIGSTVAARTLGEVIIAGLQSNNLAFILQGGLIVAALAILIHAGF 233

Query: 234 SFSSR 238
           S   R
Sbjct: 234 SALER 238