Pairwise Alignments

Query, 385 a.a., ABC transporter ATP-binding subunit from Pseudomonas putida KT2440

Subject, 357 a.a., ABC-type spermidine/putrescine transport systems, ATPase components from Variovorax sp. SCN45

 Score =  172 bits (436), Expect = 1e-47
 Identities = 90/228 (39%), Positives = 139/228 (60%), Gaps = 4/228 (1%)

Query: 19  KAVDSVSLTVNEGEICVFLGPSGCGKSTTLKMINRLITPTSGQVFINGEDTTGLDEVTLR 78
           +AV +++L V +GE    LGPSGCGK+TTL+MI      +SG++ + G+D T     T  
Sbjct: 17  RAVSAMNLAVEKGEFVSLLGPSGCGKTTTLQMIAGFEAVSSGRIELAGKDITHAKANT-- 74

Query: 79  RHIGYVIQQIGLFPNMTIEENITVVPRLLGWDKQKCHERARELMHMIKLEPKQYLQRYPR 138
           R +G V Q   LFP+MT+ +N++    +    K +  ER ++ + ++ LE   +  RYPR
Sbjct: 75  RGLGIVFQTYALFPHMTVADNVSFGLEMRKMPKAERTERVKQALALVHLEA--HAARYPR 132

Query: 139 ELSGGQQQRIGVIRALAADAPVLLMDEPFGAVDPINREMIQNEFFEMQRALNKTVIMVSH 198
           ELSGGQ+QR+ + RAL  + PVLL+DEP   +D   RE +Q E  ++QR +  T +MV+H
Sbjct: 133 ELSGGQRQRVALARALVIEPPVLLLDEPLSNLDAKLREEMQFELRQIQRKVGTTTVMVTH 192

Query: 199 DIDEAIKLGDKIAIFRAGKLLQLDHPDTLLAHPADDFVSNFVGQDSTL 246
           D  EA+ + D++ +   G   Q+DHP  +  HP+  F+S FVG+ + L
Sbjct: 193 DQSEAMSISDRVVVMEGGCATQIDHPQRVYEHPSTRFISTFVGKANLL 240