Pairwise Alignments

Query, 328 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

Subject, 325 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  126 bits (317), Expect = 6e-34
 Identities = 98/310 (31%), Positives = 154/310 (49%), Gaps = 17/310 (5%)

Query: 14  TDAVREQAAAWFARVQDAPRDAGLHKQLHAWLASDEHHREEYEHLCRVWQAADFIPRQHL 73
           T A  + A AW + + D P   G       WL +D  H E Y     +W+ ++ +P + L
Sbjct: 6   TPAQEQAALAWLSLLHDQP-SGGDQATFSQWLRADPAHVEAYAQAQVLWELSE-VPARKL 63

Query: 74  ---EALCRPDPVQQL---PRRRFMRQALAASVA-----VVALGLGWSGWHHLQLNHQGSL 122
              EAL     +  +    R R  R + A ++A     +V +G+GW     +  +     
Sbjct: 64  ADEEALVLQGYLNAMNPSKRSRVARWSGALAMAACLLLMVFMGVGWQPSRWVD-DFGADY 122

Query: 123 QTAFNERRQVELPDGSHLELNGNTQLQVEFSAGQRHVRLNAGEVMFSVAHDSNRPFVVDT 182
            TA  E + V L D S + L+ ++ + V+F+ G+RH++L  G   FSV H + + FVV+ 
Sbjct: 123 VTAPGEVKTVTLADQSQVTLDADSAIAVDFTQGERHIQLRRGAGFFSVTH-TGQSFVVEA 181

Query: 183 AQGSVIVTGTRFDVRLDPASTRVAVEQGSVRVQGKGDSPAQ-LTAGQGSHIDAQGLVAAP 241
             G   V GT+F+VRL PA   V V  G V V        Q LTAGQ     A+G+  A 
Sbjct: 182 GSGEARVLGTQFEVRLQPAGAEVTVLSGRVGVTPSKQGQQQILTAGQ-QVAYAEGVADAL 240

Query: 242 YAVNTGAITAWRQGKLVFDNATLAEVVAETSRYRRQPLRVAPGKVARLRLSGTFSTNDTD 301
           +AV++ +  AWR G L +  A L++VV +  RY    + +   ++   R+SG+F + D  
Sbjct: 241 HAVDSESRLAWRDGWLNYYKAPLSDVVKDLERYYPGRILLLNKEMGAKRVSGSFPSKDPQ 300

Query: 302 ALLRALPSIL 311
           A+L AL ++L
Sbjct: 301 AVLNALQAVL 310