Pairwise Alignments

Query, 328 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

Subject, 355 a.a., Probable transmembrane sensor from Variovorax sp. SCN45

 Score =  122 bits (306), Expect = 1e-32
 Identities = 107/341 (31%), Positives = 154/341 (45%), Gaps = 37/341 (10%)

Query: 19  EQAAAWFARVQDAPRDAGLHKQL--HAWLASDEHHREEYEHLCRVWQAADFIP---RQHL 73
           E+A A     + AP +A  H ++  + W +    H          W A   +    R H 
Sbjct: 12  ERALALIVEGEIAPGEAAQHARMAMNQWRSRSPEHAAALLEARHRWDALGGMAGDLRAHF 71

Query: 74  EALCRPDPVQQLPR-------RRFMRQALAASVAVVALGLGWSG----WHHLQLNHQGSL 122
           +     DP   +         RR  R+ +  S+A +  G   +G    W+  Q     + 
Sbjct: 72  D-----DPAAGMAAAAATESGRRSQRRKMLLSIAGLLGGGLVAGRGMQWYWQQPVFHAAY 126

Query: 123 QTAFNERRQVELPDG------SHLELNGNTQLQVEFSAGQRHVRLNAGEVMFSVAHDSNR 176
            T   +  +V L DG      S L++   + + V     +R V +  GEV F VAHD+ R
Sbjct: 127 NTRTAQMLKVSLADGAGDAPGSQLDIAPQSAIDVTLYRQRRVVEMARGEVRFEVAHDARR 186

Query: 177 PFVVDTAQGSVIVTGTRFDVRLDPASTRVAVEQGSVRVQGK----GDSPAQ-----LTAG 227
           PF V T    + V GT F VR       V VEQG VRVQ +    G +P       +   
Sbjct: 187 PFQVRTRGAVIEVVGTVFTVRDRGGPITVGVEQGHVRVQVRARQDGGAPYANATEVIDLR 246

Query: 228 QGSHIDAQ-GLVAAPYAVNTGAITAWRQGKLVFDNATLAEVVAETSRYRRQPLRVAPGKV 286
           +G  I+ + G   A    +T A++AWR G LVFDN  L E +A  + YR  P+  A  ++
Sbjct: 247 RGELIEVRDGHADAVRQSDTRALSAWRDGWLVFDNTPLGEALAVVNSYRASPIVGANARI 306

Query: 287 ARLRLSGTFSTNDTDALLRALPSILPVAIKAHEDGSSEIIA 327
             LRLSG F +ND+ AL+  LP+ILPV   +  DGS E+ A
Sbjct: 307 DALRLSGRFRSNDSVALVALLPTILPVTAVSRPDGSVELQA 347