Pairwise Alignments

Query, 328 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

Subject, 326 a.a., anti-FecI sigma factor FecR from Sphingobium sp. HT1-2

 Score =  134 bits (338), Expect = 2e-36
 Identities = 91/308 (29%), Positives = 145/308 (47%), Gaps = 8/308 (2%)

Query: 20  QAAAWFARVQDAPRDAGLHKQLHAWLASDEHHREEYEHLCRVWQAADFIPRQHLEALCRP 79
           +AA   AR+   P       ++ AW+ +D  H   +      W AA+ +     E    P
Sbjct: 2   EAARLLARLNSDPTPQD-EDEICAWIEADPRHGVAFARAEAAWDAAERLKSAAAEVNLPP 60

Query: 80  DP--VQQLPRRRFMRQALAASVAVVALGLGWSGWHHLQLNHQGSLQTAFNERRQVELPDG 137
               V +  +RR  R  + A+   +A  +  +       +     +TA  + R V L DG
Sbjct: 61  LEAIVSEEQQRRLSRNIMIAAGIAIAFFIVAAIVTIRTFSGVDRYETAVGQIRDVALADG 120

Query: 138 SHLELNGNTQLQVEFSAGQRHVRLNAGEVMFSVAHDSNRPFVVDTAQGSVIVTGTRFDVR 197
           S L LN N++ +V F+   R VR+  GE  F VAHD  RPF V+     +   GT F+VR
Sbjct: 121 SILHLNSNSEAEVRFTDIGRKVRVLKGEASFDVAHDKGRPFDVEVRSAQIRAVGTAFNVR 180

Query: 198 LDPASTRVAVEQGSVRVQGKGDSPAQLTAGQGSHIDAQGL---VAAPYAVNTGAITAWRQ 254
           + P+   + V QG+V V        +++AG G+ I ++ +     +P  ++    TAWR 
Sbjct: 181 MRPSVVELTVTQGTVTVHSGNSGLEKVSAGSGAVIQSRSIDLTHLSPKLIDQR--TAWRD 238

Query: 255 GKLVFDNATLAEVVAETSRYRRQPLRVAPGKVARLRLSGTFSTNDTDALLRALPSILPVA 314
             +  D  T+ +  +E +RYRR P+ +   +V+ LR+ G F  +D+   L AL   LP+ 
Sbjct: 239 QMVELDGETIEQAASEFNRYRRAPILIGDARVSSLRVGGRFRVSDSKEFLSALQLSLPIR 298

Query: 315 IKAHEDGS 322
               EDGS
Sbjct: 299 AVNGEDGS 306