Pairwise Alignments

Query, 328 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

Subject, 318 a.a., putative Transmembrane sensor protein from Pseudomonas putida KT2440

 Score =  114 bits (286), Expect = 2e-30
 Identities = 96/310 (30%), Positives = 139/310 (44%), Gaps = 19/310 (6%)

Query: 17  VREQAAAWFARVQDAPRDAGLHKQLHAWLASDEHHREEYEHLCRVWQAADFIPRQHLEAL 76
           V E A AW   + ++        +   W A+ E H        R W+    +  Q + A 
Sbjct: 10  VLEAAIAWKLSLGESSGTPDERNEFMRWHAASEEH-------ARAWRQLGAMD-QRVSAA 61

Query: 77  CRPDPVQQLPRRRFMRQALA------ASVAVVALGLGWSGWHHLQLNHQ-GSLQTAFNER 129
             P     L  R  +R+ +       A   ++   L W G   L  ++     +TA  E 
Sbjct: 62  AGPARQALLQSRASLRRRIGKVGGGLAGTFLLGALLAWVGAPSLAPSYWLADQRTATGEL 121

Query: 130 RQVELPDGSHLELNGNTQLQVEFSAGQRHVRLNAGEVMFSVAHDSNRPFVVDTAQGSVIV 189
           R + L DG+ L LN +T + +E++  QR + L+ GE+     H   RP +V T  G +  
Sbjct: 122 RTLRLEDGTLLSLNTHTAVDIEYAGAQRVIVLHQGEISVETGHQDPRPLLVRTEDGRLRP 181

Query: 190 TGTRFDVRLDPASTRVAVEQGSVRVQGKGDSPAQ-LTAGQGSHIDAQGLVAAPYAVNTGA 248
            GTRF VR +   TR+ V Q SV          Q L  GQ   ++A GL      V  GA
Sbjct: 182 LGTRFLVRREAGGTRLEVLQASVAAMPHDSGDEQVLREGQQVLMNANGL-GEVGTVPAGA 240

Query: 249 ITAWRQGKLVFDNATLAEVVAETSRYRRQPLRVAPGKVARLRLSGTFSTNDTDALLRALP 308
             AW +G LV DN  L +++A   +YR   L V   KVA LR++G+F   +TD  L +L 
Sbjct: 241 -DAWTRGMLVVDNVRLGDLLATLGQYRSGYLGV-DAKVADLRVTGSFPLTNTDLALASLV 298

Query: 309 SILPVAIKAH 318
             LPV I+ H
Sbjct: 299 PALPVKIERH 308