Pairwise Alignments

Query, 161 a.a., ECF subfamily RNA polymerase sigma-24 factor from Pseudomonas putida KT2440

Subject, 168 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

 Score = 76.6 bits (187), Expect = 2e-19
 Identities = 47/144 (32%), Positives = 77/144 (53%), Gaps = 2/144 (1%)

Query: 9   DHYHELIGTWTR-KLRSRQQAEDLTHDAFVRVLETPRE-QVEQPRAYLHQAARNIAVDGF 66
           + +H  +  W + KL +   A D+ HD FVR+L      Q+ +PR YL   AR + +D +
Sbjct: 15  EQHHSWLHGWLKGKLHNACDAADVAHDTFVRILGGRHAAQILEPRDYLATIARGLVIDRY 74

Query: 67  RREDRRQALEREAFEEGATGSGDPEAYVHALELADSVERALAELPLNCRQVFIWQKLEGL 126
           RR    QA ++   E     +   E     +E   +V++ALA L    R++F+  ++EGL
Sbjct: 75  RRHAIEQAYKQTLAERPDATAISEEDKAIIIETLVAVDKALAGLGERARRIFMLSQVEGL 134

Query: 127 TQAEIAERMGLSKNMVEKYMIRTL 150
           T  +IA+ + +S   V+K+MIR L
Sbjct: 135 TYQQIADELQVSLTTVKKHMIRAL 158