Pairwise Alignments

Query, 161 a.a., ECF subfamily RNA polymerase sigma-24 factor from Pseudomonas putida KT2440

Subject, 172 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

 Score = 72.4 bits (176), Expect = 4e-18
 Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 9/150 (6%)

Query: 7   FLDHYHELIGTWTRKLRSRQQAEDLTHDAFVRVL-----ETPREQVEQPRAYLHQAARNI 61
           + DH   L+    R +    +AEDL+ D F+R+L       PRE    PRA+L   A+ +
Sbjct: 16  YRDHRGWLLAWLRRNVACPSRAEDLSQDTFMRLLGRDELRAPRE----PRAFLMAIAKGL 71

Query: 62  AVDGFRREDRRQALEREAFEEGATGSGDPEAYVHALELADSVERALAELPLNCRQVFIWQ 121
             D FRR    QA   E      +    PE     LE   +++R L +L    R  F++ 
Sbjct: 72  LFDYFRRAALEQAYLTELMLIPESEHPSPEEQHLILEDLKAIDRLLGKLSSKARAAFLYN 131

Query: 122 KLEGLTQAEIAERMGLSKNMVEKYMIRTLR 151
           +L+G+  AEIA+R+G+S   V +Y+ + +R
Sbjct: 132 RLDGIGHAEIAQRLGVSVPRVRQYLAQGIR 161