Pairwise Alignments

Query, 161 a.a., ECF subfamily RNA polymerase sigma-24 factor from Pseudomonas putida KT2440

Subject, 160 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

 Score =  117 bits (292), Expect = 1e-31
 Identities = 63/148 (42%), Positives = 93/148 (62%), Gaps = 2/148 (1%)

Query: 9   DHYHELIGTWTRKLRSRQQAEDLTHDAFVRVLETPREQ-VEQPRAYLHQAARNIAVDGFR 67
           ++Y EL+     KL +RQ AED+ HDA+VRVLE   +  +EQPRA+L++ A N+ +DG R
Sbjct: 4   NYYRELVCFLNAKLGNRQVAEDVVHDAYVRVLERSSDTPIEQPRAFLYRTALNLVIDGHR 63

Query: 68  REDRRQALEREAFE-EGATGSGDPEAYVHALELADSVERALAELPLNCRQVFIWQKLEGL 126
           R   RQ    +  + E    S  P  +    +  + +ERALAELP  CR  F+ +KLEGL
Sbjct: 64  RNALRQVEPLDVLDAEERFASSSPHTHHDHGQRLELLERALAELPPACRDSFLLRKLEGL 123

Query: 127 TQAEIAERMGLSKNMVEKYMIRTLRHLR 154
           T  +IAER+ +S+ MVEK+++  ++H R
Sbjct: 124 THLQIAERLSISRAMVEKHIVNAMKHCR 151