Pairwise Alignments

Query, 161 a.a., ECF subfamily RNA polymerase sigma-24 factor from Pseudomonas putida KT2440

Subject, 169 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

 Score = 80.1 bits (196), Expect = 2e-20
 Identities = 50/148 (33%), Positives = 78/148 (52%), Gaps = 1/148 (0%)

Query: 4   HKGFLDHYHELIGTWTRKLRSRQQAEDLTHDAFVRVLETPREQVE-QPRAYLHQAARNIA 62
           H  + DH+  L G   R+L  R+ A D+  D F+R+L + R   + + R+YL Q ARN+ 
Sbjct: 12  HLLYRDHHGWLQGWLRRRLGDREHAADVAQDTFLRLLVSGRFPGDKESRSYLAQIARNLV 71

Query: 63  VDGFRREDRRQALEREAFEEGATGSGDPEAYVHALELADSVERALAELPLNCRQVFIWQK 122
           +D +RR    +A            S   E     LE    ++  L  +P N RQ F+  +
Sbjct: 72  IDQWRRLRIERAYLESIAHLPEPESPSLETRALILETLMQIDAMLDRMPDNVRQAFLLSQ 131

Query: 123 LEGLTQAEIAERMGLSKNMVEKYMIRTL 150
            EGL+ A+IAER+G++ + V+KYM R +
Sbjct: 132 FEGLSYAQIAERLGVTVSSVQKYMTRAI 159