Pairwise Alignments

Query, 161 a.a., ECF subfamily RNA polymerase sigma-24 factor from Pseudomonas putida KT2440

Subject, 169 a.a., KEGG: RNA polymerase sigma-70 factor, ECF subfamily from Variovorax sp. SCN45

 Score = 82.4 bits (202), Expect = 3e-21
 Identities = 53/151 (35%), Positives = 82/151 (54%), Gaps = 9/151 (5%)

Query: 7   FLDHYHELIGTWTRKLRSRQQAEDLTHDAFVRVLETPRE-QVEQPRAYLHQAARNIAVDG 65
           + DH+  L+    RKL +   A DL  D FVR+L +     + +PRAYL   A  IA   
Sbjct: 15  YSDHHPWLLDMLRRKLGNLDNAADLAQDTFVRILSSNEAGPLREPRAYLTTVASRIAAQY 74

Query: 66  FRREDRRQALEREAFEEGA----TGSGDPEAYVHALELADSVERALAELPLNCRQVFIWQ 121
           FRR     ALER   E  A      +  PE  +  +E   +V R L  L  + R++F+  
Sbjct: 75  FRR----LALERTYLEAIAHLPEASAPSPETRLLVVEALAAVSRVLDGLKPHVREIFLMA 130

Query: 122 KLEGLTQAEIAERMGLSKNMVEKYMIRTLRH 152
           +L+GLT ++IA+++G++ N+V+K M++  RH
Sbjct: 131 QLDGLTYSQIAQQLGVTINVVQKAMLKAYRH 161