Pairwise Alignments

Query, 161 a.a., ECF subfamily RNA polymerase sigma-24 factor from Pseudomonas putida KT2440

Subject, 170 a.a., KEGG: RNA polymerase sigma-70 factor, ECF subfamily from Variovorax sp. SCN45

 Score = 84.0 bits (206), Expect = 1e-21
 Identities = 50/148 (33%), Positives = 80/148 (54%), Gaps = 1/148 (0%)

Query: 7   FLDHYHELIGTWTRKLRSRQQAEDLTHDAFVRVLETPREQ-VEQPRAYLHQAARNIAVDG 65
           + +H   L G   R+L     A DLT D FVRV+   + Q +++PRAYL   A+ +  + 
Sbjct: 14  YREHRDWLQGWLRRRLGDGHTAADLTQDTFVRVISGGQAQAIQEPRAYLTTLAQRVLYNF 73

Query: 66  FRREDRRQALEREAFEEGATGSGDPEAYVHALELADSVERALAELPLNCRQVFIWQKLEG 125
           +RR +  +A       +    +  PE Y    E  ++++R L  LP   R+ F+ ++LEG
Sbjct: 74  WRRRELERAWLDALAAQPQELAPSPETYALVREAVETIDRWLDGLPPKVREAFLLRRLEG 133

Query: 126 LTQAEIAERMGLSKNMVEKYMIRTLRHL 153
           L  A+IA RMG+S   VE+Y+ + + HL
Sbjct: 134 LAHADIAVRMGISITSVERYVKQAIVHL 161