Pairwise Alignments

Query, 161 a.a., ECF subfamily RNA polymerase sigma-24 factor from Pseudomonas putida KT2440

Subject, 167 a.a., Extracytoplasmic function (ECF) sigma factor VreI from Variovorax sp. SCN45

 Score = 76.6 bits (187), Expect = 2e-19
 Identities = 54/140 (38%), Positives = 77/140 (55%), Gaps = 4/140 (2%)

Query: 8   LDHYHELIGTWTRKLRSRQQAEDLTHDAFVRVL-ETPREQVEQPRAYLHQAARNIAVDGF 66
           ++ Y +L G  TR+L S   A D  HD +VR+  ++  E V QP+A+L  AA NIAVD  
Sbjct: 14  VERYDQLKGQLTRRLGSSDLAGDALHDTWVRLAGKSEIEPVRQPQAFLLNAATNIAVDRL 73

Query: 67  RREDRRQALER--EAFEEGATGSGDPEAYVHALELADSVERALAELPLNCRQVFIWQKLE 124
           R E R  +  +  + FE     +G  EA     ELA  V  A+  LP   R++    +LE
Sbjct: 74  RVEARMLSESQVDDLFEVEDPAAGPAEALEARFELAALVG-AMERLPARQREILFAVRLE 132

Query: 125 GLTQAEIAERMGLSKNMVEK 144
           GL++ E+AER G+S  MV +
Sbjct: 133 GLSRDELAERYGISVRMVAR 152