Pairwise Alignments

Query, 161 a.a., ECF subfamily RNA polymerase sigma-24 factor from Pseudomonas putida KT2440

Subject, 175 a.a., RNA polymerase, sigma-24 subunit, ECF subfamily from Sphingobium sp. HT1-2

 Score = 74.3 bits (181), Expect = 9e-19
 Identities = 48/141 (34%), Positives = 74/141 (52%), Gaps = 10/141 (7%)

Query: 27  QAEDLTHDAFVRVLETPREQVEQPRAYLHQAARNIAVDGFRREDRRQALEREAFEEGA-- 84
           +A+DL  + +VR        +   RAYL++ A+N+ +D  R + RR A ER   ++    
Sbjct: 33  EADDLLQELWVRARNVAAGPIGNGRAYLYKMAQNLVLDRLREQQRRMARERRWNDQETDF 92

Query: 85  TGSG-DP-------EAYVHALELADSVERALAELPLNCRQVFIWQKLEGLTQAEIAERMG 136
           T  G DP       E  + A E    ++ AL  LP   R+ F   KL GLT  E+A ++G
Sbjct: 93  TAPGIDPVDRSQTAEDQIIAREEVQRIKTALETLPEGARRAFELHKLRGLTHGEVAAQLG 152

Query: 137 LSKNMVEKYMIRTLRHLREHL 157
           +SK+ VEK+M   +++LR  L
Sbjct: 153 ISKSGVEKHMAVAMKYLRRAL 173