Pairwise Alignments

Query, 161 a.a., ECF subfamily RNA polymerase sigma-24 factor from Pseudomonas putida KT2440

Subject, 191 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 70.9 bits (172), Expect = 1e-17
 Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 1/133 (0%)

Query: 19  TRKLRSRQQAEDLTHDAFVRVLETPREQVEQPRAYLHQAARNIAVDGFRREDRRQALERE 78
           +R++  R  A DL  + F+R    P  +VE    YL + A N+A+D  R E  R+ +   
Sbjct: 37  SRRVGCRATASDLVQELFLRFWRRPEVKVEALDTYLLRCAGNLAIDHLRSESSRERVAEA 96

Query: 79  AFEEG-ATGSGDPEAYVHALELADSVERALAELPLNCRQVFIWQKLEGLTQAEIAERMGL 137
           A     A+ +  PE  V        +E  L  LP   RQ+F+  ++ G   +EIA+ M L
Sbjct: 97  AVPVSEASLAQAPEQAVEVDHDLQRIEATLRALPERTRQIFLLNRIHGCKYSEIAKAMQL 156

Query: 138 SKNMVEKYMIRTL 150
           S++ VEK+M+R L
Sbjct: 157 SQSAVEKHMMRAL 169