Pairwise Alignments

Query, 161 a.a., ECF subfamily RNA polymerase sigma-24 factor from Pseudomonas putida KT2440

Subject, 168 a.a., putative RNA polymerase sigma-70 factor from Pseudomonas putida KT2440

 Score = 70.1 bits (170), Expect = 2e-17
 Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 2/142 (1%)

Query: 7   FLDHYHELIGTWTRKLRSRQQAEDLTHDAFVRVLETPREQV--EQPRAYLHQAARNIAVD 64
           + +H+  L G   RKL +   A DL HD FVR+L          +PRA L   A+ + VD
Sbjct: 16  YTEHHGWLQGWLGRKLGNACDAADLAHDTFVRLLSRQGNPYFGNEPRALLTHIAKGLVVD 75

Query: 65  GFRREDRRQALEREAFEEGATGSGDPEAYVHALELADSVERALAELPLNCRQVFIWQKLE 124
            +RR+D  +A               PE     LE    ++  L ++P   RQVF+  +L+
Sbjct: 76  RWRRQDVERAYLEAIAHLPQPEVPSPETRWLILETLYRIDAMLRDMPARVRQVFLLSQLD 135

Query: 125 GLTQAEIAERMGLSKNMVEKYM 146
           GLT A+IAE++ +S   +++ M
Sbjct: 136 GLTYAQIAEQLQVSLITIKRDM 157