Pairwise Alignments

Query, 161 a.a., ECF subfamily RNA polymerase sigma-24 factor from Pseudomonas putida KT2440

Subject, 171 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 75.9 bits (185), Expect = 3e-19
 Identities = 58/147 (39%), Positives = 86/147 (58%), Gaps = 20/147 (13%)

Query: 17  TWTRK-LRSR----QQAEDLTHDAFVRVLETPR-EQVEQPRAYLHQAARNIAVDGFRRED 70
           TW R  LRSR    + A DL  D FVR+L   +   +++PRAYL   AR + +D FRR  
Sbjct: 21  TWLRGWLRSRVGCSEHAADLAQDTFVRLLRARQMSPLKEPRAYLSSIARGLMIDQFRR-- 78

Query: 71  RRQALEREAFEEGATGSGDPEAYVHALE----LADSVER---ALAELPLNCRQVFIWQKL 123
             +ALER A++EG      PEA V + E    + DS+ER   AL +L    RQ F+  +L
Sbjct: 79  --RALER-AYQEGLAHL--PEAEVPSEEDKLVILDSLERLDRALQQLKPRVRQAFLLAQL 133

Query: 124 EGLTQAEIAERMGLSKNMVEKYMIRTL 150
           +GL+  ++A+R+G+S+  VE+ + + L
Sbjct: 134 DGLSIVQVAQRLGVSRATVERDLAKAL 160