Pairwise Alignments

Query, 380 a.a., conserved lipoprotein of unknown function from Pseudomonas putida KT2440

Subject, 740 a.a., hypothetical protein from Variovorax sp. SCN45

 Score = 47.4 bits (111), Expect = 1e-09
 Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 15/149 (10%)

Query: 50  GDGQGETYNTLVPAIENDRIYASDVNGEVFALDRITGDVVWKKDLELQVSGAVGV---GY 106
           G G     ++L  A    R   + + G V A+D  T  V WKK +   ++   G+   G 
Sbjct: 478 GMGYVSAAHSLTEASNGLRPPGTYMTGAVVAVDPGTNLVKWKKQMPYSLAHGNGILTTGS 537

Query: 107 GLVMLGTLKGEVIALDSSTGEERWRSRVTSEVLAPPAN---NGDVVVVQTQDDRLI--GL 161
            L+ +G   G ++A+D++ G E WR +  + + A P     +G+  V        I  G 
Sbjct: 538 NLLFIGQPDGNLLAMDANDGSELWRFQTGAAISASPITYEIDGEQYVAVFSGGTSIPYGD 597

Query: 162 DAATGDRRWIYENSPAVLTLRGTGAPIAT 190
            A  GDR W ++       + GT  P AT
Sbjct: 598 SAPRGDRLWAFK-------VGGTVQPPAT 619



 Score = 38.1 bits (87), Expect = 8e-07
 Identities = 49/227 (21%), Positives = 74/227 (32%), Gaps = 7/227 (3%)

Query: 45  WSRSIGDGQGETYNTLVPAIENDRIYASDVNGEVFALDRITGDVVWKKDLE----LQVSG 100
           W   I  G     N     + +  +Y     G V A+D  TG   WK         +   
Sbjct: 107 WVNQIEGGMNTGNNQSTTVVVDGVVYIESAVGNVIAVDGKTGLTKWKWTTPYGAITRRGV 166

Query: 101 AVGVGYGLVMLGTLKGEVIALDSSTGEERWRSRVTSEVLAPPANNGDVVVVQTQDDRLIG 160
           AV    GLV        ++AL + TG   W  +  S    P        V     D+ + 
Sbjct: 167 AVAKDLGLVFTVATGNRLVALRTDTGAIAWIKQYPSSTTDPDYQGSLQKVALVYHDKRLY 226

Query: 161 LDAATGDRRWIYENSPAVLTLRGTGAPIATNRLAVAGLSTGKVVAVDINNGVPVWESRVA 220
           L    G+R   +  S   LT +   +     R    G  T    A     G   W     
Sbjct: 227 LGTNDGNRGAAF--SADALTGKVLTSFWGVPRAGEIGYDTWGGAAESDRTGATPWIHPAV 284

Query: 221 IPKGRSELDRVVDIDGGLLLSGGTL-YVSTYQGRVAGLDLESGRELW 266
            P+         ++ GG   +G T   ++ +   +  LDL++G   W
Sbjct: 285 DPELGLVYWTFGNVRGGSSQNGSTRPGLNLFANSIVALDLKTGEYKW 331



 Score = 27.7 bits (60), Expect = 0.001
 Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 14/112 (12%)

Query: 158 LIGLDAATGDRRWIYENSPAVLTLRGTGAPIATNRLAVAGLSTGKVVAVDINNGVPVWES 217
           ++ +D  T   +W  +  P  L   G G     + L   G   G ++A+D N+G  +W  
Sbjct: 506 VVAVDPGTNLVKW-KKQMPYSLA-HGNGILTTGSNLLFIGQPDGNLLAMDANDGSELWRF 563

Query: 218 RVAIPKGRSELDRVVDIDGGLLLSGGTLYVSTYQGRVA---GLDLESGRELW 266
           +       S +   +D         G  YV+ + G  +   G     G  LW
Sbjct: 564 QTGAAISASPITYEID---------GEQYVAVFSGGTSIPYGDSAPRGDRLW 606