Pairwise Alignments

Query, 369 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase from Pseudomonas putida KT2440

Subject, 442 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) from Xanthobacter sp. DMC5

 Score =  200 bits (508), Expect = 7e-56
 Identities = 145/403 (35%), Positives = 209/403 (51%), Gaps = 53/403 (13%)

Query: 6   PIKRRESRKIWVGNVPVGGDAPIAVQSMTNTDTNDVAATVAQIQRLVDAGVDIVRVSVPD 65
           P +R  +  + VG V VGG AP+ VQSMTNTDT D+A TV Q+  L  AG +IVR++V  
Sbjct: 23  PARRHATVGVPVGRVMVGGGAPVVVQSMTNTDTADIAGTVRQVAALARAGSEIVRITVDR 82

Query: 66  MDAAEAFGKI-----KQRVSVPLVADIHFDYKIALRVAELGVDCL---RINPGNIG---- 113
            +AA A   I      Q + VPLV D H+     L       + L   RINPGN+G    
Sbjct: 83  DEAAAAVPHIYEKLLAQGIDVPLVGDFHYIGHKLLADHPACAEALAKYRINPGNVGFGDK 142

Query: 114 REDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGE-----PTPA--------ALVES 160
           ++ +  A+V+ A     P+RIG N GSL+ +L  +  +     P PA        ALV S
Sbjct: 143 KDRQFAAIVETAIRHDKPVRIGANWGSLDGELLTRLMDENARLPRPAEARAVTREALVRS 202

Query: 161 ALRHVEHLDRLDFQDFKV--SVKASDVFMAVEAYRLLAKQIVQPLHLGITEAGGLRSGTV 218
           AL      + +     ++  S K S V   +  Y  LA++    LHLG+TEAG    G V
Sbjct: 203 ALLSAALAEEIGLGRNRIILSAKVSAVQDLIAVYSELARRSDYALHLGLTEAGMGSKGIV 262

Query: 219 KSAVGLGMLLAEGIGDTIRISLAADP----VEEVKVGYDILKSLHLRSRGINFIACPSCS 274
            S   +G++L +GIGDTIR+SL  +P      EV+V  +IL+++ LR+      ACP C 
Sbjct: 263 ASTAAMGVVLQQGIGDTIRVSLTPEPNGDRTREVQVAQEILQTMGLRTFVPLVAACPGCG 322

Query: 275 RQNFDVVKTMNELEGRLEDLL--------------VPLDVAVIGCVVNGPGEAKEAHVGL 320
           R    V     EL   ++D++                L+VAV+GC+VNGPGE+K A +G+
Sbjct: 323 RTTSTV---FQELAQSVQDMIRTRMPVWKAQYPGVETLNVAVMGCIVNGPGESKHADIGI 379

Query: 321 ----TGGTPNL-IYIDGKPAQKLTNDNLVDELEKLIRQKAAEK 358
               TG TP+  ++IDGK    L   N+ +E  +++    A++
Sbjct: 380 SLPGTGETPSAPVFIDGKKVATLRGANIQEEFRQMVEAYVAKR 422