Pairwise Alignments

Query, 369 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase from Pseudomonas putida KT2440

Subject, 424 a.a., (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin) (EC 1.17.7.3) from Variovorax sp. SCN45

 Score =  206 bits (523), Expect = 1e-57
 Identities = 148/411 (36%), Positives = 215/411 (52%), Gaps = 54/411 (13%)

Query: 8   KRRESRKIWVGNV-PVGGDAPIAVQSMTNTDTNDVAATVAQIQRLVDAGVDIVRVSVPDM 66
           + R++  +W   V  VGGDAP+ VQSMTNTDT D   T  Q++ L  AG ++VR++V   
Sbjct: 17  RSRQASVVWGPRVVTVGGDAPVRVQSMTNTDTVDAIGTAIQVKELALAGSEMVRITVNTP 76

Query: 67  DAAEAFGKIKQR-----VSVPLVADIHFDYKIALRVAELGVDCL---RINPGNIGREDR- 117
           +AA     I+++     V VPL+ D H++    L       + L   RINPGN+G+ D+ 
Sbjct: 77  EAAAQVPYIREQLDRMGVDVPLIGDFHYNGHRLLTDYPACAEALSKYRINPGNVGKGDKK 136

Query: 118 ---VRAVVDAARDRGIPIRIGVNAGSLEKDL-------QKKYGEPTPA------ALVESA 161
                 ++DAA     P+RIGVN GSL+++L         +  +P  A      AL+ SA
Sbjct: 137 DKQFGQMIDAAMRWNKPVRIGVNWGSLDQELLASLMDTNSQRAQPWDAKQVMYEALITSA 196

Query: 162 LRHVEHLDRLDFQDFKV--SVKASDVFMAVEAYRLLAKQIVQPLHLGITEAGGLRSGTVK 219
           +   +  + +     +V  S K S V   +  YR LA++   PLHLG+TEAG    GTV 
Sbjct: 197 IESAKLAESMGMAGNQVILSCKVSGVQDLISVYRELARRCEYPLHLGLTEAGMGTKGTVA 256

Query: 220 SAVGLGMLLAEGIGDTIRISLAADP----VEEVKVGYDILKSLHLRSRGINFIACPSCSR 275
           SA  L +LL EGIGDTIR+SL   P     +EV +  +IL++L LR    +  ACP C R
Sbjct: 257 SATALSILLQEGIGDTIRVSLTPQPGESRTQEVLIANEILQALGLRVFVPSVTACPGCGR 316

Query: 276 QNFDVVKTMNELEGRLEDLL--------------VPLDVAVIGCVVNGPGEAKEAHVGL- 320
                  T  EL  +++D L                L VAV+GC+VNGPGE+K A +G+ 
Sbjct: 317 ---TTSTTFQELAKQIDDYLRMQMPVWRKKYPGVETLKVAVMGCIVNGPGESKHADIGIS 373

Query: 321 ---TGGTPNL-IYIDGKPAQKLTNDNLVDELEKLIRQKAAEKAEADAALIA 367
              TG  P   ++IDG+ A  L  DN+ +E  +L+     ++   + A+ A
Sbjct: 374 LPGTGEAPAAPVFIDGEKALTLRGDNIANEFHQLVETYIEKRFGGEHAVAA 424