Pairwise Alignments

Query, 335 a.a., Transcriptional regulator, Cro/CI family from Pseudomonas putida KT2440

Subject, 327 a.a., Cro/Cl family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  427 bits (1097), Expect = e-124
 Identities = 225/337 (66%), Positives = 254/337 (75%), Gaps = 12/337 (3%)

Query: 1   MNAAHPEVAVAPGQNPGELLRLAREKRDWSQAEVARKLNLTVSSLNHVETGAFDKLPGHT 60
           M AAHPEV  A   NPG+ LR ARE   WS AEVA KLNLT +SL ++E GAFDKLPGHT
Sbjct: 1   MKAAHPEVVAANRVNPGDTLRQARESNGWSLAEVALKLNLTTTSLGNLEAGAFDKLPGHT 60

Query: 61  FARGYIRAYAKLMDLDQAALVDAFDRYTGTHAKGSDVHSLGRIEEPVRLSHNILRGVSLL 120
           FARGYIRAYAKL+ +DQA LV  FD++TGT ++GS+VH LGRIEEPVR+SH ILR VSLL
Sbjct: 61  FARGYIRAYAKLLGIDQAILVQEFDQFTGTDSQGSNVHGLGRIEEPVRVSHTILRIVSLL 120

Query: 121 LLVAVVGGGFFWWQDQGSLRGKELAKIALEHVEVESADGTTQIHPLDEPEDQAVSAGQQP 180
           LL+AV+GGGF WWQDQ S R K+L   A+EHVEVESADGTTQIHPLDEPEDQAV+ GQ  
Sbjct: 121 LLIAVIGGGFVWWQDQASQRTKDLTSNAMEHVEVESADGTTQIHPLDEPEDQAVAEGQAL 180

Query: 181 ESAPLALEQGAAEQPAAAEQAPVSSEATIATAPVQPAPAASPAPVTP--PVQATAAPAPA 238
             AP+     A EQPAA E AP    A  A AP  PA  A+P   TP  PVQA A PAPA
Sbjct: 181 PEAPV-----ATEQPAAPETAP----AATAAAPT-PATPAAPVAQTPAAPVQAPATPAPA 230

Query: 239 PAPAPAVAAVEPAAVPAGSAKVAIQFTADCWTQVSDGNGKVLFSAIKRKGDNLELTGKPP 298
              APA++     A+ AG  +V I F ADCWTQV+DGNGKVLFS +KRKGD L+  GKPP
Sbjct: 231 APVAPAISPPTAPALIAGDGRVQITFIADCWTQVTDGNGKVLFSGLKRKGDTLDQGGKPP 290

Query: 299 FAVRLGFARGAQVSYNGQAVDVAPFTSGETARLKLGQ 335
             +RLGFARGAQV+YNGQ VDVAPFT+GETARLKLGQ
Sbjct: 291 LTLRLGFARGAQVAYNGQPVDVAPFTTGETARLKLGQ 327