Pairwise Alignments

Query, 335 a.a., Transcriptional regulator, Cro/CI family from Pseudomonas putida KT2440

Subject, 331 a.a., cytoskeleton protein RodZ from Dickeya dianthicola ME23

 Score =  125 bits (314), Expect = 1e-33
 Identities = 100/330 (30%), Positives = 156/330 (47%), Gaps = 30/330 (9%)

Query: 16  PGELLRLAREKRDWSQAEVARKLNLTVSSLNHVETGAFDKLPGHTFARGYIRAYAKLMDL 75
           PGE LR ARE+   +Q  VA +L L VS++  +E          TF RGYIR+YA+L+ L
Sbjct: 17  PGERLREARERLGLTQQVVAERLCLKVSTVREIEDNNTPAGLAPTFLRGYIRSYARLVHL 76

Query: 76  DQAALVDAFDRYTGTHAKGSDVHSLGRIE--EPVRLSHNILRGVSLLLLVAVVGGGFFWW 133
            +  L+   ++     ++ S+V  +  +   +  +     L   + L+L+ V+     WW
Sbjct: 77  PEDELLPMLEKQV-VPSRVSNVAPMQSLALGKSRKKRDGWLMLFTWLILLGVLSLTVAWW 135

Query: 134 QDQGSLRGKEL------AKIALEHVEVESADGTTQIHPLDEPEDQAVSAGQQPESAPLAL 187
                 + +E+      A  +    + ++AD  +   P+D   D+ V         P+ L
Sbjct: 136 WQNHQAQQQEINSMVDHANASQNRKDGQAADVNSDPEPVDS--DENVVGAPSGNGQPIVL 193

Query: 188 EQGAAEQPAAAEQAPVSSEATIATAPVQPAPAASPAPVT---PPVQATAAPAPAPAPAPA 244
              AA     A  +PV        AP   APAA+ A       P+   +A APA A   A
Sbjct: 194 NPPAAASSQPAVSSPV--------APATSAPAAASAAAQFSEQPLLNQSATAPASAAPAA 245

Query: 245 VAAVEPAAVPAGSAKVAIQFTADCWTQVSDGNGKVLFSAIKRKGDNLELTGKPPFAVRLG 304
            A+  P A+        ++FTADCW +V D  GK LFS ++R G  L LTG+ P+ +++G
Sbjct: 246 DASGAPGAI-------VMRFTADCWLEVVDAAGKKLFSGVQRNGSVLNLTGQAPYRLKIG 298

Query: 305 FARGAQVSYNGQAVDVAPFT-SGETARLKL 333
                QV + G+ VD++ F  S + ARL L
Sbjct: 299 APGAVQVDFQGKPVDLSRFVKSHQVARLTL 328