Pairwise Alignments

Query, 620 a.a., Sec Translocation Complex SecD subunit from Pseudomonas putida KT2440

Subject, 369 a.a., Protein-export membrane protein SecF from Xanthobacter sp. DMC5

 Score = 60.8 bits (146), Expect = 1e-13
 Identities = 46/212 (21%), Positives = 96/212 (45%), Gaps = 5/212 (2%)

Query: 399 ISLATIQSPLGSQFRITGLNGQGESSELALLLRAGGLAAPMYFAEE-RTIGPSLGADNIT 457
           + +    SP     RI G  G  + ++ A+L +  G+    Y      T+GPS+  + + 
Sbjct: 80  VQIQEFGSPRDVLIRI-GAFGTTDEAQQAILAKVQGVLGTDYSVRRVETVGPSVSGELVR 138

Query: 458 KGIDASLWGMLFVSLFIIAIYR-AFGVLATIALAGNMVLLLALMSLLGATLTLPGIAGIV 516
           + I A + G + V  ++   +   F V A +    ++ + L + S  G    L  IA I+
Sbjct: 139 QSILALVLGAVAVLGYLWFRFEWQFAVGAIVTTMHDIFVTLMIYSAFGIDFDLTSIAAIL 198

Query: 517 LTMGMAVDANVLIFSRIREEIA--AGMSVQRAIHEGFNRAYSAIVDANLTTLLVGGILFA 574
             MG +++  V+++ RIRE +     + +   +    N  +S  +  + TT      L+ 
Sbjct: 199 TIMGYSLNDTVVVYDRIREMLRRYKKLPLPELLDIAVNATFSRTIIVSTTTFFATLALYF 258

Query: 575 MGTGPVKGFAVTMSLGIFTSMFTAVMVTRALV 606
            G   ++GF++ M++G+    ++ + V   ++
Sbjct: 259 FGGEVLRGFSLAMTVGVVIGTYSTIFVAAPIL 290