Pairwise Alignments

Query, 620 a.a., Sec Translocation Complex SecD subunit from Pseudomonas putida KT2440

Subject, 989 a.a., protein-export membrane protein, SecD/SecF family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  211 bits (536), Expect = 2e-58
 Identities = 133/351 (37%), Positives = 192/351 (54%), Gaps = 44/351 (12%)

Query: 267 VQDTAEAKRILGKT-------ANLEFRFGAEP----GASKATTEVFEFREGGRSAAVERG 315
           V+DT    RIL +          L F +  +P    G         E   G   A +E  
Sbjct: 325 VKDTVTINRILNREDIKPLLPRGLTFMWSVKPREVDGEELLELHAMETPRGTEQAPLE-- 382

Query: 316 LIITGDQVTDAQASFDEHGRPQVNIRLDGHGGELMSRATRSNVGRSMAVIFIEQKPVTRY 375
               GD +TDA+   D+   P V++ ++  G     + T  N+GR +AV+      +  Y
Sbjct: 383 ----GDVITDAKQVLDQSSNPAVSMSMNADGARKWRKMTAENIGRRIAVV------LDNY 432

Query: 376 VKQAVGGVEKDVAVQSFVEEKKIISLATIQSPLGSQFRITGLNGQGESSELALLLRAGGL 435
           V  A                     L  I S    Q  ITG     E+ +LA +L++G L
Sbjct: 433 VYTAPN------------------ILGEIPS---GQSEITGNFTIEEAKDLANILKSGTL 471

Query: 436 AAPMYFAEERTIGPSLGADNITKGIDASLWGMLFVSLFIIAIYRAFGVLATIALAGNMVL 495
            AP    EE  IGP+LG +   +GI++ + G++ V LF+IA Y   G +A  AL  N+  
Sbjct: 472 PAPTNIVEEAIIGPTLGKEAQAQGINSMVAGLVIVVLFMIAYYAKGGFVAIAALVFNIFF 531

Query: 496 LLALMSLLGATLTLPGIAGIVLTMGMAVDANVLIFSRIREEIAAGMSVQRAIHEGFNRAY 555
           +L +++ LG  LTLPGIAGIVLT+GM++DANVLIF RI+EE+AAG  + +AI  G+N+A+
Sbjct: 532 ILGILAQLGTALTLPGIAGIVLTIGMSIDANVLIFERIKEELAAGAGLLQAITSGYNKAF 591

Query: 556 SAIVDANLTTLLVGGILFAMGTGPVKGFAVTMSLGIFTSMFTAVMVTRALV 606
           SAI+D+N+TT L G IL+A+G GPVKGFA+ + +GI +S F+AV +TR +V
Sbjct: 592 SAILDSNVTTFLTGAILYALGQGPVKGFAIVLMIGIASSFFSAVFITRVIV 642



 Score = 58.2 bits (139), Expect = 2e-12
 Identities = 37/169 (21%), Positives = 86/169 (50%), Gaps = 9/169 (5%)

Query: 447 IGPSLGADNITKGIDASLWGMLFVSLFIIAIYRA--FGVLATIALAGN---MVLLLALMS 501
           +G ++  D     ++A  + ++ + L+I+  +R   + + + IALA +   +V   A+ S
Sbjct: 802 VGATVADDIKNSSMEAMFFALVAIFLYILLRFRKWQYSLASIIALAHDTLFVVAAFAIAS 861

Query: 502 LLGATLTLPG--IAGIVLTMGMAVDANVLIFSRIREEIA--AGMSVQRAIHEGFNRAYSA 557
             GAT  +    IA ++  +G +++  V++F RIRE I       + +  ++  N+  + 
Sbjct: 862 AFGATFEIDQVFIAAMLTVIGYSINDTVIVFDRIRENITNRGTSKLVKMFNDAINQTMAR 921

Query: 558 IVDANLTTLLVGGILFAMGTGPVKGFAVTMSLGIFTSMFTAVMVTRALV 606
            +  + TTL+V  +L   G   ++GF+  + +G+    ++++ +   +V
Sbjct: 922 TLITSFTTLIVVIVLLIFGGEVLRGFSFALFVGVLVGTYSSIYIATPIV 970



 Score = 47.8 bits (112), Expect = 2e-09
 Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 32/175 (18%)

Query: 125 LGLDLSGGVHFLLEV---DMDKAMTARMK-------VYEGEVKTLLRKER---VRYRSLP 171
           LGLDL GG+H  L V   ++ K +    K       V E E  +    E+   + Y +  
Sbjct: 83  LGLDLQGGMHVTLAVSPVEIVKGLAGNSKNEAFNAAVDEAEELSKTSNEKFVDLFYAAWK 142

Query: 172 QQDGGIMLGFADDATREQARALIRKNFNDFDLTTTDRNELAVLRLALTQAKVAEIREYSI 231
           ++ G   L         + R           L ++D   L++         + E  E +I
Sbjct: 143 EKSGDKQLNTIYATAANRGR---------ISLESSDSEILSI---------IDEEVENAI 184

Query: 232 KQNLTTVRNRVNELGVAEPLVQR-QGANRIVVELPGVQDTAEAKRILGKTANLEF 285
            ++   +R R++  G ++P +QR QG  RI +ELPGV +    + +L   A L+F
Sbjct: 185 DRSFNILRTRIDRFGTSQPNIQRIQGTGRIQIELPGVDNQERVRNLLQGVAKLQF 239