Pairwise Alignments

Query, 620 a.a., Sec Translocation Complex SecD subunit from Pseudomonas putida KT2440

Subject, 532 a.a., Protein translocase subunit SecD from Azospirillum sp. SherDot2

 Score =  296 bits (758), Expect = 2e-84
 Identities = 193/532 (36%), Positives = 287/532 (53%), Gaps = 63/532 (11%)

Query: 97  LGDDYVVALNLAQTTPQWLRNLGASPMKLGLDLSGGVHFLLEVDMDKAMTARMKVYEGEV 156
           +G D + AL      P W  N   S   LGLDL GG H LLEVDM   +  R++      
Sbjct: 28  MGRDTLAAL------PSWYANTRVS---LGLDLRGGSHLLLEVDMATVIRDRVEGLVDGA 78

Query: 157 KTLLRKERVRYRSLPQQDGGIMLGFADDATREQARALIRKNFN------------DFDLT 204
           +  LR   V Y +L   +  + +   D A  E+A   +R+  +            D D+T
Sbjct: 79  RQQLRTANVGYTALNAGERAVTVQLRDPAQAEEAVKALRQLSSPVGRTALGGGQPDLDVT 138

Query: 205 TTDRNELAVLRLALTQAKVAEIREYSIKQNLTTVRNRVNELGVAEPLVQRQGANRIVVEL 264
                    + +AL++  + +    +I+Q++  VR R++E GV EP + RQG +RI+V+L
Sbjct: 139 VNG----GTVTVALSEVALRDRATQAIEQSIEIVRRRIDETGVNEPTIARQGNDRILVQL 194

Query: 265 PGVQDTAEAKRILGKTANLEFRF---GAEPGASKAT--TEVFEFREGGRSAA---VERGL 316
           PGV+D    KR+LG TA + FR     A+P   +A   +E+    EG R  +   + + +
Sbjct: 195 PGVEDPDRIKRLLGTTAKMTFRLVDVNADPSTGRAPPGSEILPSTEGDRYQSKYVIRKKV 254

Query: 317 IITGDQVTDAQASFD-EHGRPQVNIRLDGHGGELMSRATRSNVGRSMAVIFIEQKPVTRY 375
            + G  + +A A  + + G   VN   +  G    +  T+ NVGR  A++          
Sbjct: 255 EVDGATLQNASAGTNPQTGEWVVNFEFNTAGANRFAEVTKQNVGRPFAIVL--------- 305

Query: 376 VKQAVGGVEKDVAVQSFVEEKKIISLATIQSPL-GSQFRITGLNGQGESSELALLLRAGG 434
                              + K+IS   I+ P+ G + +I+G      +++L++LLRAG 
Sbjct: 306 -------------------DNKVISAPVIREPITGGRGQISGNFTAANANDLSVLLRAGA 346

Query: 435 LAAPMYFAEERTIGPSLGADNITKGIDASLWGMLFVSLFIIAIYRAFGVLATIALAGNMV 494
           L AP+   EERT+GP LGAD+I  G+ A + G + V +++IA Y  FG  A  AL  N+V
Sbjct: 347 LPAPLKVIEERTVGPDLGADSIRAGLTAVVVGFVMVCIYMIACYGLFGAFACSALFINLV 406

Query: 495 LLLALMSLLGATLTLPGIAGIVLTMGMAVDANVLIFSRIREEIAAGMSVQRAIHEGFNRA 554
           L LA +SLL ATLTLPGIAG++L++G+AVDAN+LI  RIREE   G  V  ++  GF+RA
Sbjct: 407 LTLAALSLLQATLTLPGIAGVLLSLGLAVDANILINERIREETKKGRGVFASMEAGFSRA 466

Query: 555 YSAIVDANLTTLLVGGILFAMGTGPVKGFAVTMSLGIFTSMFTAVMVTRALV 606
           YS IVD+NLTT +   +LF  GTG +KGFAVT++ GI  SMFTA ++ R ++
Sbjct: 467 YSTIVDSNLTTAIKMALLFVFGTGTIKGFAVTITFGILISMFTATVLVRLMM 518