Pairwise Alignments

Query, 620 a.a., Sec Translocation Complex SecD subunit from Pseudomonas putida KT2440

Subject, 633 a.a., Protein translocase subunit SecD from Acinetobacter radioresistens SK82

 Score =  595 bits (1533), Expect = e-174
 Identities = 322/633 (50%), Positives = 442/633 (69%), Gaps = 21/633 (3%)

Query: 4   KYPLWKYALIVLVLVVGFIYSAPNLYPDDPAVQISGASSALQVNQADLDRVSKALVDAKI 63
           +YP WKY LI++VLV+  +Y+ P+LYPD+PAVQISGA +  Q++Q+ + +  + L +A I
Sbjct: 2   RYPAWKYLLILVVLVISTLYALPSLYPDEPAVQISGAKAGTQIDQSVIQKAEQILKEANI 61

Query: 64  AVKGASLGEKGSGLIRLTNQEDQLPAKDVVRKALGDDYVVALNLAQTTPQWLRNLGASPM 123
                +     + L+R+ + + QL AKDV+R+ALG++YVVALNLA TTP+WL+ +GA PM
Sbjct: 62  PSHDNTF-TNNAALLRVDSTDAQLKAKDVLRRALGEEYVVALNLAPTTPEWLQKIGAKPM 120

Query: 124 KLGLDLSGGVHFLLEVDMDKAMTARMKVYEGEVKTLLRKERVRYRSLPQQDGGIMLGFAD 183
           KLGLDL GGVHFLLEVDMDKA++ RM+    +++  LR+  +++ SL   +  I L FA 
Sbjct: 121 KLGLDLRGGVHFLLEVDMDKALSQRMETSATDLRRQLRENNLKFNSLTLNNNQINLQFAQ 180

Query: 184 DATREQARALIRKNFNDFDLTTTDRNELAVLRLALTQAKVAEIREYSIKQNLTTVRNRVN 243
           +  RE     +R+N N+F       +   +LRL  T A+  EI+ Y++ QNLTT+RNR+N
Sbjct: 181 NDDREAVMDFLRRNGNEFTQQALASSTGPMLRLTYTDARRQEIQSYAVNQNLTTLRNRIN 240

Query: 244 ELGVAEPLVQRQGANRIVVELPGVQDTAEAKRILGKTANLEFRFGAE-------PGASKA 296
           ELGVAE LVQ QG+NRIVV+LPGVQDTAEAKR+LG+TANLEFR  ++       P   K+
Sbjct: 241 ELGVAEALVQTQGSNRIVVDLPGVQDTAEAKRVLGRTANLEFRLVSDLNDQYIDPYTGKS 300

Query: 297 T-------TEVFEFR--EGGRSAAVERGLIITGDQVTDAQASFDEH-GRPQVNIRLDGHG 346
                   TE+F +   + GR   ++R  I+TG++V +A + F +  G  +VNI LD  G
Sbjct: 301 NGQPLPPGTELFAYESLDSGRQLLLQRNRILTGERVQNASSGFSQDTGGAEVNITLDSAG 360

Query: 347 GELMSRATRSNVGRSMAVIFIEQKPVTRYVKQAVGGVEKDVAVQSFVEEKKIISLATIQS 406
           G+LM+ ATR+ VG+ MAV+FIE K    YV   V G + +V       E  +I+ ATIQ+
Sbjct: 361 GKLMADATRNAVGKRMAVLFIENKQRISYVTDPVTGTQTEVRTP--YAESVVINAATIQA 418

Query: 407 PLGSQFRITGLNGQGESSELALLLRAGGLAAPMYFAEERTIGPSLGADNITKGIDASLWG 466
            LGSQFRITGL+   E+SELAL+LRAG LAAPMYF EER +GPSLG +NI KG+ ++  G
Sbjct: 419 VLGSQFRITGLDSPQEASELALMLRAGALAAPMYFVEERVVGPSLGQENIDKGVLSTQIG 478

Query: 467 MLFVSLFIIAIYRAFGVLATIALAGNMVLLLALMSLLGATLTLPGIAGIVLTMGMAVDAN 526
            L V+++++  +R FG++A  AL  N+ + L++MS +GA LTLPGIAGIV+T+GMAVDAN
Sbjct: 479 FLLVAIWMVVFFRLFGLIANFALVFNLAMTLSIMSWIGAALTLPGIAGIVITIGMAVDAN 538

Query: 527 VLIFSRIREEIAAGMSVQRAIHEGFNRAYSAIVDANLTTLLVGGILFAMGTGPVKGFAVT 586
           VLI  RIREE+  G S ++AI  G++RAY+ I D+NLTT LV  ILFA+GTGP+KGFAVT
Sbjct: 539 VLICERIREEMKWGASPKQAIVAGYDRAYNTIFDSNLTTFLVAFILFAIGTGPIKGFAVT 598

Query: 587 MSLGIFTSMFTAVMVTRALVNLTCG-GRDIKKL 618
           + +GI  SMFTA+ VTRA+V +  G  R++KKL
Sbjct: 599 LMIGIACSMFTAITVTRAIVQIIYGKRRNLKKL 631