Pairwise Alignments

Query, 275 a.a., phosphonate ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 279 a.a., ABC transporter, permease protein (cluster 12, methionine/phosphonates) / ABC transporter, permease protein (cluster 12, methionine/phosphonates) from Variovorax sp. SCN45

 Score =  298 bits (763), Expect = 9e-86
 Identities = 162/272 (59%), Positives = 192/272 (70%), Gaps = 7/272 (2%)

Query: 7   RDPALLPRLLLALLAVAVLWPAIQTSELNPGVLLQADNRQQIASFTSAFWPPAHDADFLA 66
           RDP  + RL   L A+ + WP +  SE NP  L  + N   I  F + F+PP     FLA
Sbjct: 12  RDPQAMRRLAGCLAALVIAWPMLALSEFNPWALFTSGNLAVIGGFLAGFFPPDGSPAFLA 71

Query: 67  LLYEATLQTLAVATAGMALALLLAIPAGLLASRALSLRAASRGG---RAGLWSRLLRLPV 123
           LL +ATL+TLA+ATAG+ALALL+  P G + +RALS+     G    RAG+    +R   
Sbjct: 72  LLLKATLETLAMATAGIALALLIGAPLGFVTTRALSVSRIGPGPGRVRAGI----VRQAA 127

Query: 124 RGLLIFLRSVPEIVWALLFVRAVGLGPTAGVLAIAITYSGMLGKVYAEIFESVDQRPAHA 183
           R LL+ LR++PEIVWALLFVR  GLGP AGVLA+AITY GMLGKVYAEI ES D RPA A
Sbjct: 128 RWLLMVLRAIPEIVWALLFVRVFGLGPAAGVLALAITYGGMLGKVYAEILESTDTRPARA 187

Query: 184 LLQAGSGRLAAFFYGILPNAASEVVSYTVYRWECAVRASVVMGFVGAGGLGQQIDLSMRM 243
           LL+ GSGRLAA  YG+LPN A E+ SYTVYRWECAVRASVVMGFVGAGGLGQ +D SM+M
Sbjct: 188 LLEGGSGRLAALCYGLLPNTAQELASYTVYRWECAVRASVVMGFVGAGGLGQLMDQSMKM 247

Query: 244 FAGAQVASMLLTFLLLVILADLLSRLLRWRLA 275
             G + +S+LL FL LV+LADLLS  LR  LA
Sbjct: 248 LNGGEASSILLVFLALVLLADLLSNALRRLLA 279