Pairwise Alignments

Query, 284 a.a., phosphonate transport system-binding protein from Pseudomonas putida KT2440

Subject, 286 a.a., ABC transporter, substrate-binding protein (cluster 12, methionine/phosphonates) from Variovorax sp. SCN45

 Score =  328 bits (842), Expect = 6e-95
 Identities = 171/279 (61%), Positives = 207/279 (74%), Gaps = 3/279 (1%)

Query: 8   LAAGLVLSCCAAVVQAAETLRVSAIPDEAPTELQRKFKPLGEYLAKQLGMEVKFVPVADY 67
           LA  L LS  +    A   LRVSAIPDEAPTELQRKF PLG+YL K+ GM+V+F PV DY
Sbjct: 9   LALALSLSAASLGAFAQGVLRVSAIPDEAPTELQRKFTPLGDYLKKETGMDVQFTPVTDY 68

Query: 68  PAVVESLAADRLDLAWLGGFTFVQVHLK-DPTATPLVQREQDAQFTSKFIT-ANPDVKSL 125
            AVVE LA +++DLAWLGGFTFVQ  ++ +  A P+VQR +D  FTSKFI   +   K+L
Sbjct: 69  AAVVEGLATNKIDLAWLGGFTFVQARIRTNGGAVPIVQRAEDEVFTSKFIVPVDSTAKTL 128

Query: 126 SDLKGKSFAFGSISSTSGSLMPRYFMLKQDNIKPEEYFSRVAYSGAHDATVAWVQAGKVD 185
           +DLKGK+FAFG+ SSTSGSLMPRYF+L Q  I PE+ F  VA+SGAHDATVA+V A + +
Sbjct: 129 ADLKGKTFAFGAPSSTSGSLMPRYFLL-QAGINPEKDFKTVAFSGAHDATVAFVAASRAE 187

Query: 186 GGVLNASVWQKLVDAGKVDTTKVKVFATTPTYFDYNWTVRGNMDPALKQKIKKAFLDLDP 245
            GVLNASVW KLV+A   +  KV+V ATTPTY+DYNWTVR  +DPAL +K+  AFL LDP
Sbjct: 188 AGVLNASVWDKLVEAKNPNAAKVRVLATTPTYYDYNWTVRPGLDPALTRKLADAFLKLDP 247

Query: 246 SNPEHKAILDLQAASRFIETKPENYKGTEQAAREAGLLK 284
           +NP HK I+ LQ AS+FI TK  NY G E A + AGL+K
Sbjct: 248 ANPAHKEIMALQRASKFIPTKSSNYDGIETAGKSAGLIK 286