Pairwise Alignments

Query, 370 a.a., tRNA 2-selenouridine synthase from Pseudomonas putida KT2440

Subject, 364 a.a., tRNA 2-selenouridine synthase from Pseudomonas simiae WCS417

 Score =  533 bits (1374), Expect = e-156
 Identities = 262/363 (72%), Positives = 302/363 (83%), Gaps = 1/363 (0%)

Query: 1   MRPDCTDFRQLFLDDVPMMDMRAPVEFAKGAFPGVVNLPLMNDQERQKVGTCYKQQGQAA 60
           M  D TD+R +FL+D PMMD RAPVEF KGAFPG VNLPLM D ERQ+VGTCYKQQGQ A
Sbjct: 1   MATDITDYRDIFLNDRPMMDTRAPVEFVKGAFPGAVNLPLMTDDERQRVGTCYKQQGQQA 60

Query: 61  AIALGHQLVSGATKQARLEAWAAFAKAHPDGYLYCFRGGLRSQIVQGWLRDEAGIQYPRV 120
           AI LGH+LVSGA K  R+E WA FA+A+P+GYLYCFRGGLRSQIVQ WL+ EAGI+YPRV
Sbjct: 61  AIVLGHELVSGAIKAQRIEQWAQFAQANPEGYLYCFRGGLRSQIVQQWLKTEAGIEYPRV 120

Query: 121 KGGYKAMRTFLLETTQQAVEQCDFVLVGGLTGTGKTDVLHQLDNVLDLEGHANHRGSSFG 180
            GGYKAMR+FLLET +QA  QCDFVL+GG+TGTGKT+VL QL N LDLEGHANHRGSSFG
Sbjct: 121 GGGYKAMRSFLLETVEQAATQCDFVLLGGMTGTGKTEVLGQLRNALDLEGHANHRGSSFG 180

Query: 181 KRATAQPAQIDFENQLAIDVLKKRARGIGQFVLEDEGRIVGSCTVPLELYQGMQHYPLVW 240
           KRAT QP+ IDFEN+LA+D+LKKRA GI  FV+EDE R++GSC +PL L++GMQ YP+VW
Sbjct: 181 KRATGQPSNIDFENRLAVDLLKKRAGGIEGFVVEDESRMIGSCALPLPLHKGMQTYPMVW 240

Query: 241 LEDSFTNRVERILRDYVVNLSAEFKAVHGEEDGPRLFAERMLQSMANIYKRLGGERHQRL 300
           LEDS   RVERILRDYVV+L AEF  V GE+ G  LFAER+ QS+ANI+KRLGGER QRL
Sbjct: 241 LEDSVEGRVERILRDYVVDLCAEFVDVFGEQ-GHALFAERLTQSLANIHKRLGGERFQRL 299

Query: 301 SEMLREALQEQQRSGAVDLHRGWIEGLLNEYYDPMYAYQRAAKAERIEFAGDAVEVREYL 360
             ++++AL EQ RSGAVDLHR WIEGLL EYYDPMYA+QR +K  RIEFAG+   V EYL
Sbjct: 300 QAVMQDALAEQARSGAVDLHRVWIEGLLREYYDPMYAFQRESKGARIEFAGEQGAVVEYL 359

Query: 361 KAR 363
           + R
Sbjct: 360 RER 362