Pairwise Alignments

Query, 370 a.a., tRNA 2-selenouridine synthase from Pseudomonas putida KT2440

Subject, 349 a.a., Selenophosphate-dependent tRNA 2-selenouridine synthase from Variovorax sp. SCN45

 Score =  110 bits (275), Expect = 6e-29
 Identities = 90/295 (30%), Positives = 137/295 (46%), Gaps = 40/295 (13%)

Query: 18  MMDMRAPVEFAKGAFPGVVNLPLMNDQERQKVGTCYKQQGQAAAIALGHQLVSGATKQAR 77
           ++D R+P EFA    PG +N P+++D+ER+ VGT Y Q G   A  +G  +V+ A     
Sbjct: 18  LIDARSPAEFALDHIPGAINCPVLDDEERRIVGTVYVQTGAFEARRIGGAMVA-ANIARH 76

Query: 78  LEAWAAFAKAHPDGYLYCFRGGLRSQIVQGWLRDEAGIQYPRVKGGYKAMRTFLLETTQQ 137
           L    A    +    +YC+RGG+RS  +  WLR   G    ++ GGYK+ R  ++     
Sbjct: 77  LRDTLADRPENWKPLVYCWRGGMRSGSMVTWLR-LVGWDAQQLAGGYKSFRRHVISQIDA 135

Query: 138 AVEQCDFVLVGGLTGTGKTDVLHQL----DNVLDLEGHANHRGSSFGK-RATAQPAQIDF 192
              + D  ++ G TG+ KT VLH L      VLDLE  A+H+GS  G      QP+Q  F
Sbjct: 136 LTPKLDLRVICGATGSAKTRVLHALAARGAQVLDLEDFASHKGSLLGSLPGVPQPSQKHF 195

Query: 193 ENQLA-----IDVLKKRARGIGQFVLEDEGRIVGSCTVPLELYQGMQHYPLVWLEDSFTN 247
           E  +A     +D+ +          +E E   +G  ++PL L   M+    + +  +   
Sbjct: 196 ETLIAAVLEGVDLSR-------PLYVEGESIRIGRLSLPLSLVARMRAAQCIEVCATPEA 248

Query: 248 RVERILRDY---------VVNLSAEFKAVHGEE------------DGPRLFAERM 281
           R+  +LRDY         + +     K + G+E            D P LFAE M
Sbjct: 249 RLAYLLRDYAYLGDDRDALADKLGALKELQGKETVARWQQWAHEADLPHLFAELM 303