Pairwise Alignments

Query, 313 a.a., cytochrome bo terminal oxidase subunit II from Pseudomonas putida KT2440

Subject, 356 a.a., Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) from Variovorax sp. SCN45

 Score =  309 bits (791), Expect = 7e-89
 Identities = 147/274 (53%), Positives = 195/274 (71%), Gaps = 10/274 (3%)

Query: 13  LPFLGMLLLSGCNWTLLDPKGQVGIEQKNLILIATGLMLLVVIPVIIMTLAFAWKYRASN 72
           L  L  +LL+GCN  L++P G +  +Q  LI+++T LML+++IPVI +T+ FAW+YR SN
Sbjct: 26  LLLLPAVLLAGCNTVLMNPSGDIAHQQGRLIVVSTVLMLIIIIPVIALTIFFAWRYRQSN 85

Query: 73  KAATYTPDWSHSTKIEAAVWIIPILIIIALGYVTYHSTHKLDPY---------RPLDSDV 123
           K ATY+PDW HST++E A+W  P+LIIIALG +T+ STH LDPY         RP+ +D 
Sbjct: 86  KEATYSPDWDHSTQLELAIWAAPLLIIIALGAITWISTHVLDPYQPLRRLDAQRPIPADT 145

Query: 124 KPIQIDVVALDWKWLFIYPEQGIATVNKIVFPANTPVNFRVTSDAVMNSFFIPGLGGQIY 183
           KP+ ++VVALDWKWLFIYPEQGIATVN++  P + P++F++T+ +VMNSFFIP L GQIY
Sbjct: 146 KPLVVEVVALDWKWLFIYPEQGIATVNELAAPVDRPISFKITASSVMNSFFIPALAGQIY 205

Query: 184 AMAGMTTKLHLIANENGEFDGISANYSGAGFTGMKFKATATSQEDFDKWVAEVKQSPK-K 242
           AM GM TKLH + N+ GEFDG SANYSGAGF+GM+FK    S  DFD+WV +VK     +
Sbjct: 206 AMPGMETKLHAVINKPGEFDGFSANYSGAGFSGMRFKFHGLSDGDFDQWVQKVKSGKDGE 265

Query: 243 LDKAEYDALAKPSENNPVALYSEASPEQFQLIVD 276
           L +  Y  L  PSE  PV  Y+   P  +  I++
Sbjct: 266 LTRELYKKLEAPSEREPVRHYAAVDPALYDAILN 299