Pairwise Alignments

Query, 313 a.a., cytochrome bo terminal oxidase subunit II from Pseudomonas putida KT2440

Subject, 335 a.a., Cytochrome c oxidase polypeptide II (EC 1.9.3.1) from Sphingobium sp. HT1-2

 Score = 67.0 bits (162), Expect = 6e-16
 Identities = 50/207 (24%), Positives = 81/207 (39%), Gaps = 26/207 (12%)

Query: 49  LMLLVVIPVIIMTLAFAWKYRASNKAATYTPDWSHSTKIEAAVWIIPILIIIALGYVTYH 108
           L L+ +I V ++ L      R    A       SH+T IE    ++P+LI++ +   +  
Sbjct: 106 LPLITIISVFVLLLMLYVMVRYRRSANPVPSKTSHNTVIEVVWTLVPVLILLVIAIPSIG 165

Query: 109 STHKLDPYRPLDSDVKPIQIDVVALDWKWLFIYPEQGI---------------------- 146
                D Y+P   D   + + V    W W + YP+ GI                      
Sbjct: 166 LL--ADQYKPAPKDA--LTVKVTGYQWYWGYEYPDNGIPEFVSNMLPEDKAKENGEPYLL 221

Query: 147 ATVNKIVFPANTPVNFRVTSDAVMNSFFIPGLGGQIYAMAGMTTKLHLIANENGEFDGIS 206
           A  N++V P   PV   +T   V++SF +P L  ++ A+ G   +      + G + G  
Sbjct: 222 APDNRLVLPVGRPVKLIITGADVIHSFAVPSLWVKMDAVPGRLNEKSFTIEKPGVYYGQC 281

Query: 207 ANYSGAGFTGMKFKATATSQEDFDKWV 233
           +   GA    M     A     FD+WV
Sbjct: 282 SELCGARHGFMPIAIEALPPAQFDQWV 308