Pairwise Alignments

Query, 518 a.a., DNA-binding transcriptional dual regulator (NO) from Pseudomonas putida KT2440

Subject, 565 a.a., nif-specific transcriptional activator NifA from Magnetospirillum magneticum AMB-1

 Score =  246 bits (627), Expect = 2e-69
 Identities = 150/369 (40%), Positives = 218/369 (59%), Gaps = 31/369 (8%)

Query: 120 PLMVDERPWGLVTLDALTPGQFQSL---ELDALQAFASLAAATVTVAERI----EHLALR 172
           P+   ++P+G ++++       Q +   +L  L   A+L   T ++  ++    E L   
Sbjct: 128 PIKTTDKPFGALSVERSWSDSAQYVFEHDLRFLTMVATLIGQTASLHRKLANDRETLMTD 187

Query: 173 AEDEHHRAELYRQA---SGQDRELIGQSPAHKRLVEEIRLVGSSDLTVLITGETGVGKEL 229
           A   H R    R      G + +++G S A  R+  +++    +  T+L+ GE+G GKEL
Sbjct: 188 AARLHKRMAEVRPTLPIRGLE-DVVGTSEAMARVFAQVQQAAPTKATILLRGESGTGKEL 246

Query: 230 VAQALHRASSRADKPLVSLNCAALPDTLVESELFGHVRGAFTGAHGERRGKFELANGGTL 289
           VA+A+H  S+RA KP + +NCAAL ++++ESELFGH +GAFTGA  +R+G+FEL++GGTL
Sbjct: 247 VARAIHILSARAQKPFIKVNCAALSESVLESELFGHEKGAFTGAVADRKGRFELSSGGTL 306

Query: 290 FLDEVGELPLTVQAKLLRVLQSGQLQRLGSDREHRVDVRLIAATNRDLAAEVRTGNFRAD 349
           FLDE+GE+    QAKLLRVLQ G+ +R+G ++  +VDVRLIAATNRDL A V  G+FRAD
Sbjct: 307 FLDEIGEISSNFQAKLLRVLQEGEFERVGGNKTVKVDVRLIAATNRDLEAGVADGSFRAD 366

Query: 350 FYHRLSVYPLHVPPLRERGRDVLLLAGYFLEQNRSRLGLNSLRLSHEAQAALIAYDWPGN 409
            Y+RL+V PL +PPLRER  D+ LLA YFL+Q     G   L  S  A  AL    +PGN
Sbjct: 367 LYYRLNVVPLFLPPLRERSGDIPLLAMYFLKQFNEENG-RGLAFSQNALEALQRCYFPGN 425

Query: 410 VRELEHLIGRSALKALGQHPDRPRILTLEAIDLDLRVSATTPGTL-----------PSPA 458
           VRELE+ + R+A    G+         ++ +DL  +       TL           P+ +
Sbjct: 426 VRELENCVYRTATMTKGE--------VIDEMDLSCKQDTCLSSTLWHKRNPGDKAAPTLS 477

Query: 459 APLQVVTPP 467
           AP+ V T P
Sbjct: 478 APIPVPTGP 486