Pairwise Alignments

Query, 518 a.a., DNA-binding transcriptional dual regulator (NO) from Pseudomonas putida KT2440

Subject, 479 a.a., sigma-54-dependent Fis family transcriptional regulator from Magnetospirillum magneticum AMB-1

 Score =  248 bits (633), Expect = 4e-70
 Identities = 145/316 (45%), Positives = 193/316 (61%), Gaps = 15/316 (4%)

Query: 203 LVEEIRLVGSSDLTVLITGETGVGKELVAQALHRASSRADKPLVSLNCAALPDTLVESEL 262
           ++E  R V S D++VLITGE+G GKEL+A+A+H  S R +KP V  NC ALPD L+ESEL
Sbjct: 174 VIEMARKVSSFDISVLITGESGTGKELLARAIHYNSPRGNKPFVVENCGALPDQLLESEL 233

Query: 263 FGHVRGAFTGAHGERRGKFELANGGTLFLDEVGELPLTVQAKLLRVLQSGQLQRLGSDRE 322
           FG  +GAFTGA+ +R G FE A+GGT+FLDE+GE     Q KLLRVLQ G+++ LG+   
Sbjct: 234 FGCKKGAFTGAYEDRIGLFEQASGGTIFLDEIGETSPAFQVKLLRVLQEGEIRPLGARLT 293

Query: 323 HRVDVRLIAATNRDLAAEVRTGNFRADFYHRLSVYPLHVPPLRERGRDVLLLAGYFLEQN 382
            +VDVR+IAATNR+L  EVR  +FR D ++RL+ +P+H+PPLRER  DV LLA   L + 
Sbjct: 294 RKVDVRVIAATNRNLEEEVREKHFRRDLFYRLAAFPIHLPPLRERPMDVPLLAERLLGET 353

Query: 383 RSRLGLNSLRLSHEAQAALIAYDWPGNVRELEHLIGRSALKALGQHPDRPRILTLEAIDL 442
               G  +LR   EA A +  YDWPGNVREL++ I R  + AL +H     +L+ + +  
Sbjct: 354 GKGFGRPNLRFGPEAMAQMRGYDWPGNVRELQNEIQR--MVALAEH----AVLSPDLLSP 407

Query: 443 DLRVSATTPG-TLPSPAAPLQVVTPPEGGLREAVDSYQRQVIEACLQRHQDNWAAAAREL 501
            LR      G  L     P          L+E V+  + +++   L RH+ N    A E 
Sbjct: 408 RLRARICPAGRALADQGEP--------ATLKEQVEMLEARLLAESLGRHRWNITRVAEET 459

Query: 502 GLDRANLSRLARRLGL 517
           GL R  L    RR GL
Sbjct: 460 GLSRVGLRAKLRRYGL 475