Pairwise Alignments

Query, 518 a.a., DNA-binding transcriptional dual regulator (NO) from Pseudomonas putida KT2440

Subject, 441 a.a., sigma-54-dependent response regulator transcription factor ZraR from Escherichia coli ECRC62

 Score =  258 bits (660), Expect = 2e-73
 Identities = 144/322 (44%), Positives = 211/322 (65%), Gaps = 22/322 (6%)

Query: 193 LIGQSPAHKRLVEEIRLVGSSDLTVLITGETGVGKELVAQALHRASSRADKPLVSLNCAA 252
           ++G+SPA + L+ EI LV  S+ TVLI G++G GKELVA+A+H +S+R++KPLV+LNCAA
Sbjct: 141 MVGKSPAMQHLLSEIALVAPSEATVLIHGDSGTGKELVARAIHASSARSEKPLVTLNCAA 200

Query: 253 LPDTLVESELFGHVRGAFTGAHGERRGKFELANGGTLFLDEVGELPLTVQAKLLRVLQSG 312
           L ++L+ESELFGH +GAFTGA   R G+F  A+GGTLFLDE+G++   +Q +LLR +Q  
Sbjct: 201 LNESLLESELFGHEKGAFTGADKRREGRFVEADGGTLFLDEIGDISPMMQVRLLRAIQER 260

Query: 313 QLQRLGSDREHRVDVRLIAATNRDLAAEVRTGNFRADFYHRLSVYPLHVPPLRERGRDVL 372
           ++QR+GS++   VDVRLIAAT+RDLAAEV  G FR D Y+RL+V  + VP LR+R  D+ 
Sbjct: 261 EVQRVGSNQTISVDVRLIAATHRDLAAEVNAGRFRQDLYYRLNVVAIEVPSLRQRREDIP 320

Query: 373 LLAGYFLEQNRSRLGLNSLRLSHEAQAALIAYDWPGNVRELEHLIGRSALKALGQHPDRP 432
           LL G+FL++   R        + +A   LI YDWPGN+RELE+ + R+ +   G++    
Sbjct: 321 LLVGHFLQRFAERNRKAVKGFTPQAMDLLIHYDWPGNIRELENAVERAVVLLTGEY---- 376

Query: 433 RILTLEAIDLDLRVSATTPGTLPSPAAPLQVVTPPEGGLREAVDSYQRQVIEACLQRHQD 492
               +   +L L +++T     P P    Q + P        +   +++VI A L++   
Sbjct: 377 ----ISERELPLAIAST-----PIPLGQSQDIQP--------LVEVEKEVILAALEKTGG 419

Query: 493 NWAAAARELGLDRAN-LSRLAR 513
           N   AAR+LG+ R   L++L+R
Sbjct: 420 NKTEAARQLGITRKTLLAKLSR 441