Pairwise Alignments

Query, 518 a.a., DNA-binding transcriptional dual regulator (NO) from Pseudomonas putida KT2440

Subject, 524 a.a., nif-specific transcriptional activator NifA from Dickeya dianthicola ME23

 Score =  253 bits (645), Expect = 2e-71
 Identities = 168/395 (42%), Positives = 233/395 (58%), Gaps = 28/395 (7%)

Query: 117 MGCPLM-VDERPWGLVTLDALTPGQFQSLELDALQAFASLAAATVTVAERIEHLALRAED 175
           +G PL+ ++ +P G++   A  P       L A   F    A+ +    R+     R  D
Sbjct: 131 IGVPLLGIEPQPIGVL---AAQPMARYEERLPASTRFLETVASLIVQTVRLMQAPRR--D 185

Query: 176 EHHRAELYRQAS-------GQDRELIGQSPAHKRLVEEIRLVGSSDLTVLITGETGVGKE 228
               + + R AS       G D  ++G S A ++ +E +R V   D TVL+ GE+G GKE
Sbjct: 186 GEPSSVVSRPASCKAPRPFGFD-SMVGTSAAMRQTLEIVRQVSRWDTTVLVRGESGTGKE 244

Query: 229 LVAQALHRASSRADKPLVSLNCAALPDTLVESELFGHVRGAFTGAHGERRGKFELANGGT 288
           LVA A+H  S RA  P V  NCAALPD L+ESELFGH +GAFTGA  +R+G+FELA+GGT
Sbjct: 245 LVANAIHHNSPRAAAPFVKFNCAALPDNLLESELFGHEKGAFTGAVRQRKGRFELADGGT 304

Query: 289 LFLDEVGELPLTVQAKLLRVLQSGQLQRLGSDREHRVDVRLIAATNRDLAAEVRTGNFRA 348
           LFLDE+GE   + QAKLLR+LQ G+++R+G D   RV+VR+IAATNR L  EVR G+FR 
Sbjct: 305 LFLDEIGESSASFQAKLLRILQEGEMERVGGDETLRVNVRIIAATNRHLEEEVRAGHFRE 364

Query: 349 DFYHRLSVYPLHVPPLRERGRDVLLLAGYFLEQNRSRLGLNSLRLSHEAQAALIAYDWPG 408
           D Y+RL+V P+ +PPLRER  D++ LA + +++  +  G  +LR+S  A   L+ Y+WPG
Sbjct: 365 DLYYRLNVMPVSLPPLRERQEDIVELAQFLVKKIAAHQG-RTLRISDGAIRLLMGYNWPG 423

Query: 409 NVRELEHLIGRSALKALGQHPDRPRILTLEAIDLDLRVSATTPGTLPSPAAPLQVVTPPE 468
           NVRELE+ + R+A+       DR  IL     D    ++ TT     SP A  +     E
Sbjct: 424 NVRELENCLERAAVMTDTGLIDRDVIL-FNHHDAAPMMNKTT-----SPPAVAE-----E 472

Query: 469 GGLREAVDSYQRQVIEACLQRHQDNWAAAARELGL 503
           G L + +D  QR +  A L++     A AAR LG+
Sbjct: 473 GWLDQNLDERQRLI--AALEKTGWVQAKAARLLGM 505