Pairwise Alignments

Query, 518 a.a., DNA-binding transcriptional dual regulator (NO) from Pseudomonas putida KT2440

Subject, 461 a.a., fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein from Escherichia coli BL21

 Score =  241 bits (615), Expect = 4e-68
 Identities = 147/391 (37%), Positives = 221/391 (56%), Gaps = 32/391 (8%)

Query: 133 LDALTPGQF----QSLELDALQAFASLAAATVTVAERIEHLALRAEDEHHRAELYRQASG 188
           ++AL  G F    +  +LD L      A    ++ + I HL        H+A      S 
Sbjct: 92  VEALRCGAFDYVIKPFDLDELNLIVQRALQLQSMKKEIRHL--------HQA---LSTSW 140

Query: 189 QDRELIGQSPAHKRLVEEIRLVGSSDLTVLITGETGVGKELVAQALHRASSRADKPLVSL 248
           Q   ++  SPA   + ++   +  S  +VLI+GE+G GKEL+A+A+H  S RA  P + +
Sbjct: 141 QWGHILTNSPAMMDICKDTAKIALSQASVLISGESGTGKELIARAIHYNSRRAKGPFIKV 200

Query: 249 NCAALPDTLVESELFGHVRGAFTGAHGERRGKFELANGGTLFLDEVGELPLTVQAKLLRV 308
           NCAALP++L+ESELFGH +GAFTGA   R+G FE AN GTL LDE+GE+PL +QAKLLR+
Sbjct: 201 NCAALPESLLESELFGHEKGAFTGAQTLRQGLFERANEGTLLLDEIGEMPLVLQAKLLRI 260

Query: 309 LQSGQLQRLGSDREHRVDVRLIAATNRDLAAEVRTGNFRADFYHRLSVYPLHVPPLRERG 368
           LQ  + +R+G  +  +VD+R+IAATNRDL A V+ G FR D ++RL+V  L +PPLR+R 
Sbjct: 261 LQEREFERIGGHQTIKVDIRIIAATNRDLQAMVKEGTFREDLFYRLNVIHLILPPLRDRR 320

Query: 369 RDVLLLAGYFLEQNRSRLGLNSLRLSHEAQAALIAYDWPGNVRELEHLIGRSALKALGQH 428
            D+ LLA +FL++  S    + + +   A + L A+ WPGN+REL ++I R+ +   G  
Sbjct: 321 EDISLLANHFLQKFSSENQRDIIDIDPMAMSLLTAWSWPGNIRELSNVIERAVVMNSGP- 379

Query: 429 PDRPRILTLEAIDLDLRVSATTPGTLPSPAAPLQVVTPPEG--GLREAVDSYQRQVIEAC 486
                I+  E +   +R      G         +V T P G   L+E +   ++++I   
Sbjct: 380 -----IIFSEDLPPQIRQPVCNAG---------EVKTAPVGERNLKEEIKRVEKRIIMEV 425

Query: 487 LQRHQDNWAAAARELGLDRANLSRLARRLGL 517
           L++ + N    A  LG+ R  L    +  G+
Sbjct: 426 LEQQEGNRTRTALMLGISRRALMYKLQEYGI 456