Pairwise Alignments

Query, 478 a.a., Outer membrane efflux protein from Pseudomonas putida KT2440

Subject, 480 a.a., Type I secretion outer membrane protein, TolC family from Sphingobium sp. HT1-2

 Score =  109 bits (273), Expect = 2e-28
 Identities = 107/400 (26%), Positives = 185/400 (46%), Gaps = 31/400 (7%)

Query: 59  MAPVASGERLSLTDAVLQAAQWHPSIAEAIGNLYKQGEGINVARAGYYPQISGGIRTGY- 117
           MA VA  E  +L  A+ +A + +P++  A        E + + +A   P  +  ++    
Sbjct: 23  MAGVAHAE--TLQGALAKAYRTNPTLTGARAGQRATDENVPIQKAAGRPTANSQLQFQEL 80

Query: 118 ----DTGYGGDRNSQALNLSLKQMLYDFGKVDSAVNAAQAAAARAQANILLVVDDLARDT 173
                  +     S + + S+   +Y  G V ++V AA+      QAN+      +   T
Sbjct: 81  VIRPSNSFLAPHRSASASGSIDVPIYSGGTVRNSVKAAETRVESGQANLRGTEASVFSQT 140

Query: 174 AYAWIETRRYEQLMTIARDQIRGVGDIAGMARQRSDMGASTRSDVVQAESRVESARATLE 233
             A+++  R   L+++    ++ +         R ++G  TR+DV Q+ESR+E AR+ L+
Sbjct: 141 VAAYMDVIRDIALVSLNAANVKVLEVNLQATNDRFEVGDVTRTDVAQSESRLELARSDLQ 200

Query: 234 EYQSQYERWRSTLAALMGRV-----TPPALAEGSPAELDQACKRPAQGDDRLPAVLMALA 288
             +S     R    A++G       +PPAL  G PA+ D A  R A  D+  P +L A  
Sbjct: 201 RAESNLITSRENYIAMVGEAPVDLESPPAL-PGLPADPDSAV-RVALADN--PDILAAQK 256

Query: 289 QRAQGQAELAQAKAEAYPTLS--LQPQVNHYLDDDYNRDNARLDRTQAGIYLNVEVPIYQ 346
            R   + ++  AK    PTLS   Q     Y+D D   +       QA +   + +P YQ
Sbjct: 257 SREAARYDVKAAKGATLPTLSGFSQGSYTDYMDKDIAANK------QAAVGATLTIPFYQ 310

Query: 347 GGSISARTRAAGHALTAADSAEDAARLQARRG-LAEAKAQTSGLGRRLTSLEARQVSIQE 405
           GG  +A+ R       A +S     +++  RG +++A+A  + L   L ++++ Q ++  
Sbjct: 311 GGRPAAQVRQN----QALESQAIERQIEVERGVISQARAAYAALQASLRTIQSSQKAVDA 366

Query: 406 ARM-LYG-RQYLDLGTRPLLDLLNAEQEIYQSRFELAGTR 443
           A + L G R    +G+R +LD+LNAEQE   ++ EL   R
Sbjct: 367 AELSLEGVRAENSVGSRTILDILNAEQESLNAKVELVTAR 406