Pairwise Alignments

Query, 478 a.a., Outer membrane efflux protein from Pseudomonas putida KT2440

Subject, 470 a.a., outer membrane channel protein TolC from Dickeya dianthicola ME23

 Score = 82.0 bits (201), Expect = 4e-20
 Identities = 87/400 (21%), Positives = 164/400 (41%), Gaps = 19/400 (4%)

Query: 63  ASGERLSLTDAVLQAAQWHPSIAEAIGNLYKQGEGINVARAGYYPQISGGIRTGYDTGYG 122
           A+ +   L     QA   +P +  A  N     E IN AR+   PQ+  G    Y+ GY 
Sbjct: 18  AASQAEDLLQVYQQAKTTNPDLRSAAANRDAAFEKINEARSSLLPQLGLGADYTYNNGYR 77

Query: 123 G----DRNSQALNLSLKQMLYDFGKVDSAVNAAQAAAARAQANILLVVDDLARDTAYAWI 178
                + N  + +L L Q +++   +  A+   +  A     +       L  +T+ A+ 
Sbjct: 78  DRKDVNNNVTSASLQLTQSIFNMS-LWRALTLQEKQAGIQDVSYQTSQQTLLLNTSTAYF 136

Query: 179 ETRRYEQLMTIARDQIRGVGDIAGMARQRSDMGASTRSDVVQAESRVESARATLEEYQSQ 238
              R    ++    Q + +        QR ++G    +DV  A S+ +S  A+    ++ 
Sbjct: 137 NVLRAIDALSYVSAQKQSIYRELDQTTQRFNVGLVAITDVQNARSQYDSVLASEVTARNN 196

Query: 239 YERWRSTLAALMGRVTPPA----LAEGSPAELDQACKRPAQGDDRLPAVLMALAQRAQGQ 294
            +     L  + G   P      +   SP + D       + ++R  ++L A   +   +
Sbjct: 197 LDNAMEILRQVTGNFYPQLAGLNIDRFSPQKPDAVNGLLKEAENRNLSLLSARLSQDLAR 256

Query: 295 AELAQAKAEAYPTLSLQPQVN----HYLDD---DYNRDNARLDRTQAGIYLNVEVPIYQG 347
            ++  A++   PTL+L         +Y      D N  +  + + Q G  L+  +PIY G
Sbjct: 257 EQIRSAESGHLPTLNLTASTGVTNTNYSGSRVADSNLSDTYVGQNQIG--LSFSLPIYSG 314

Query: 348 GSISARTRAAGHALTAADSAEDAARLQARRGLAEAKAQTSGLGRRLTSLEARQVSIQEAR 407
           G  S+R + A H+  A+  + ++A     + L  A    S     + + +   +S Q + 
Sbjct: 315 GGTSSRVKQAQHSFVASSESMESAHRSVIQTLRSAHNNISASISSVNAYKQAVISAQSSL 374

Query: 408 MLYGRQYLDLGTRPLLDLLNAEQEIYQSRFELAGTRSDLL 447
                 Y  +GTR ++D+L+A   +Y ++ +L+G R D L
Sbjct: 375 DAMEAGY-QVGTRTIVDVLDATTTLYNAKQQLSGARYDYL 413