Pairwise Alignments

Query, 722 a.a., Protein secretion ABC efflux system, permease and ATP-binding protein from Pseudomonas putida KT2440

Subject, 586 a.a., Efflux ABC transporter, permease/ATP-binding protein from Variovorax sp. SCN45

 Score =  208 bits (529), Expect = 7e-58
 Identities = 171/564 (30%), Positives = 275/564 (48%), Gaps = 16/564 (2%)

Query: 173 LRPYG-QVMIASLVANVLALAGVLFSMQVYDR-----VIPAESLPTLYVL--FGGVVLAL 224
           LRPY  Q+++A +   + A+  + F + +        V P +   T+ +   FG +    
Sbjct: 16  LRPYRVQIVLAGVFLVMAAVTTLAFPIALRSLIDGGFVNPDKGAQTMALRDHFGALFAVA 75

Query: 225 VFDFSMRLLRLKVTDLLGKRADLRVSDLVYGHALRLRNSV-RPKSTGSFISQLR-ELESI 282
           V        R      LG+R    + + VYG  L+   +      TG  +S+L  +   +
Sbjct: 76  VALGLFSAARFYTVSWLGERVTADIRNAVYGRVLKQSPAFFETTQTGEVLSRLTADTTLV 135

Query: 283 RDLITSSTATVLADLPFFLLFLFVF-WLIGGVLVFIPLVALLAMVLPGLLAQRRLARLAN 341
           + ++ SS +  L +    +  L V  W    V+V + L  L+ +VLP +   RR+ +L+ 
Sbjct: 136 QTVVGSSLSMGLRNAVMGVGALAVLVWTNPYVMVQV-LGILVLVVLPSMWFGRRVRKLSR 194

Query: 342 ASMRESALRNAMLVESIQGLDEIKALQAEARFERQWNQYNAACAHTNLRLRTLTNGLVTW 401
           AS    A  +A+  E +  +  +++  AE R   ++N        T +R     + LV +
Sbjct: 195 ASQDRVADSSAIAAEVLNAIPVVQSYTAEGREASRFNGSTENAFRTAVRRTKARSVLVAF 254

Query: 402 TQNVQGAVFAVVIVIGAPMVIAGDLTTGSLVAASMLSSRMMAPLAQLTHVLTRWQQAKVA 461
                 A     +  G   V+ GD+T G L    +  + + +  A L  V     +A  A
Sbjct: 255 IIIATSAALLWGLYQGTQAVLRGDITAGHLGQTVVYVAILASATAVLGEVYGDLLRAAGA 314

Query: 462 LQGLDKLMQSP--VDHPEGEARVHLPAIHGEYRLRQANFRY-SEDYPPVLNIGRLDIQPG 518
            + L +L+ +P  +  P   A   +PA     R     F Y S    P L    LD+ PG
Sbjct: 315 TERLMELLHAPSAIFSPANPAVTPVPAAGSAIRFDAVTFHYPSRPGTPALRDFSLDVAPG 374

Query: 519 ERIAVLGRNGAGKSTLLQALGGAMDLVQGEISLDGIAMAHLDPADLRRDVGLLPQYARLF 578
           E +A++G +GAGKST+ Q L    D   G + LDG  +A L  +DLR  +GL+PQ A +F
Sbjct: 375 ETVALVGSSGAGKSTVFQLLLRYYDPQSGRLILDGAPLASLALSDLRTRIGLVPQDAVIF 434

Query: 579 HGTLRENLTLGAGQASDQELVAALAATGALDFVRRLPKGMDHLILEGGLGLSGGQRQALV 638
             +  EN+  G  +A+ +E+ AA  A  A DF++ LP+G D  + E G+ LSGGQRQ + 
Sbjct: 435 STSAFENIRYGRPEATAEEVHAAARAAFAHDFLQALPEGYDTFLGERGVRLSGGQRQRIA 494

Query: 639 LSRLLVRQPQVLLLDEPTASLDDMTERKLLDNLERFCQGRTLVIATHRLSVLQRVDRILV 698
           ++R +++ P +LLLDE T++LD  +ER +   LE   +GRT ++  HRL+ +Q+ DRI+V
Sbjct: 495 IARAILKNPPLLLLDEATSALDAESERMVQAALESAMEGRTTLVIAHRLATVQKADRIIV 554

Query: 699 LDAGRIVIDDARDAALAKLQGAQA 722
           LD G IV +    AAL    G  A
Sbjct: 555 LDHGGIV-EQGTHAALVAQGGVYA 577