Pairwise Alignments

Query, 722 a.a., Protein secretion ABC efflux system, permease and ATP-binding protein from Pseudomonas putida KT2440

Subject, 605 a.a., Type I secretion system ATPase, LssB family LapB from Variovorax sp. SCN45

 Score =  202 bits (513), Expect = 5e-56
 Identities = 155/519 (29%), Positives = 253/519 (48%), Gaps = 22/519 (4%)

Query: 183 SLVANVLALAGVLFSMQVYDRVIPAESLPTLYVLFGGVVLALVFDFSMRLLRLKVTDLLG 242
           SL  ++  L   +F +QVYDRV+      TL  L  G+   L  +F +R  R ++    G
Sbjct: 45  SLPISLFGLLPSIFLLQVYDRVLSRSGTSTLAALVSGIFFFLCIEFWLRTRRSRLLRNAG 104

Query: 243 KRADLRVSDLVYGHAL-RLRNSVRPKSTGSFISQLRELESIRDLITSSTATVLADLPFFL 301
              D  VS  +    L R   ++  +   S+    R++ S+R  +T   A  + DLP  +
Sbjct: 105 AIIDHGVSGALLNSMLARPLRALESRPASSWQLYFRDVGSVRGTVTGGLAQSIFDLPMAI 164

Query: 302 LFLFVFWLIGGVLVFIPLVALLAMVLPGLL----AQRRLARLANASMRESALRNAMLVES 357
             L V  ++   L  +P+VA+   ++  L      + R  R+          R  +  E 
Sbjct: 165 FALIVIGIVA--LPVLPVVAVFLAIMSFLAWWWADEVRTGRVEEVQRGRGLDR--VTSEI 220

Query: 358 IQGLDEIKALQAEARFERQWNQ-YNAACAHT---NLRLRTLTNGLVTWTQNVQGAVFAVV 413
               + +K    +      W Q YNA    +   N ++ T  +G       V   VF+V+
Sbjct: 221 CHARETLKTQANDGPTIEMWRQTYNAWLTESFSKNGQIETARDGTT-----VLLTVFSVI 275

Query: 414 IV-IGAPMVIAGDLTTGSLVAASMLSSRMMAPLAQLTHVLTRWQQAKVALQGLDKLMQSP 472
           +V +GA  V+   +T G LVA++ML+ + + P+A L         AK A + L+ +++ P
Sbjct: 276 VVTVGAVSVMEQWMTVGGLVASNMLALKALQPVAGLVSNWRSLATAKEAAKRLETVLREP 335

Query: 473 VDHPEGEARVHLPAIHGEYRLRQANFRYSED-YPPVLNIGRLDIQPGERIAVLGRNGAGK 531
           V+ P     + LP   G   LR  +F ++++   PVL    LDI PG    ++GRNGAGK
Sbjct: 336 VEKPP--TGMELPQPLGRVTLRDVSFSFTQNAQQPVLENVDLDIGPGGLHVIVGRNGAGK 393

Query: 532 STLLQALGGAMDLVQGEISLDGIAMAHLDPADLRRDVGLLPQYARLFHGTLRENLTLGAG 591
           STL++ + G     +G +++    ++     +L R +  L Q    F G L + +  GA 
Sbjct: 394 STLVKLVSGLYTPTRGTVNIGEYDLSQFGREELSRWISYLSQEVYWFGGALVDVMRRGAP 453

Query: 592 QASDQELVAALAATGALDFVRRLPKGMDHLILEGGLGLSGGQRQALVLSRLLVRQPQVLL 651
             SD+++VAA   +GA DF+ RLP G   ++ EGG G S G+R+ L L+   +R+P VL+
Sbjct: 454 GQSDEQIVAACKLSGAHDFISRLPDGYRTVVGEGGTGFSVGERRKLALAMSFLRKPSVLV 513

Query: 652 LDEPTASLDDMTERKLLDNLERFCQGRTLVIATHRLSVL 690
           LDEP+  LD  +ER LL  +    + RT+V+ TH L ++
Sbjct: 514 LDEPSNDLDFQSERNLLATMLAVAKVRTVVVVTHSLRIV 552