Pairwise Alignments

Query, 722 a.a., Protein secretion ABC efflux system, permease and ATP-binding protein from Pseudomonas putida KT2440

Subject, 726 a.a., Type I secretion system ATPase, LssB family LapB from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  691 bits (1783), Expect = 0.0
 Identities = 362/704 (51%), Positives = 485/704 (68%), Gaps = 3/704 (0%)

Query: 13  APAPEQAAAHRPDLGPWLEVMLQVAHHYRLDVSPQRIRLAAAE-DARPLNEILRHMARQA 71
           AP  E+  + R  L  W + +  VA HYR+  SP  I+  A     +     L  +ARQA
Sbjct: 5   APDVEEVLSERA-LSQWAQAISYVAGHYRVACSPGSIQANAPWLRGKSRTTALTQLARQA 63

Query: 72  GLALRFVHFDAKGLRQWRTPLVLELDDGQLAVVESVTEEDDLAVVFAGDQGLTSRLPRDT 131
           GL+      D     QWR PLV+EL DGQL V+E V  E+ + V    ++G  +RL    
Sbjct: 64  GLSFHAPDIDKTAFSQWRLPLVVELRDGQLLVIEHVNGEEAVDVFVIEEEGQRNRLTLSE 123

Query: 132 LKGRISRVALLRPARPLRDVRTDDYTAPYDRHWFARIVLRDLRPYGQVMIASLVANVLAL 191
           L   I  VA LRP   L+D R D Y + +   W   +VL+D+RPY  VM+A+ + NVL+L
Sbjct: 124 LLPEILYVAALRPLSALKDSRVDRYISRFKPDWMRELVLQDIRPYLPVMVAAFLINVLSL 183

Query: 192 AGVLFSMQVYDRVIPAESLPTLYVLFGGVVLALVFDFSMRLLRLKVTDLLGKRADLRVSD 251
           AG++FSMQVYDRVIPA+S PTLYVL  GV++A++F F +R  R  + D+LGKRAD+R+SD
Sbjct: 184 AGIVFSMQVYDRVIPAQSYPTLYVLSFGVLVAVLFGFLLREARTHIMDVLGKRADMRISD 243

Query: 252 LVYGHALRLRNSVRPKSTGSFISQLRELESIRDLITSSTATVLADLPFFLLFLFVFWLIG 311
            V+GHALRLRNS  P+STGSFISQLRELE IR++ITSST   + DLPFF LF+ V  +I 
Sbjct: 244 RVFGHALRLRNSAIPRSTGSFISQLRELEQIREMITSSTLATIVDLPFFFLFMIVLAIIA 303

Query: 312 GVLVFIPLVALLAMVLPGLLAQRRLARLANASMRESALRNAMLVESIQGLDEIKALQAEA 371
             L +I  VA L M+LPG+  Q++LA LAN +  E+ LRNA+LVES+QGL++IK +QAE 
Sbjct: 304 PPLAWIAPVAALLMILPGVALQKKLAVLANQAAHEATLRNAVLVESVQGLEDIKLMQAEN 363

Query: 372 RFERQWNQYNAACAHTNLRLRTLTNGLVTWTQNVQGAVFAVVIVIGAPMVIAGDLTTGSL 431
           RF +QWN Y      + LR R LT GL++W  +VQ  V+A VI+ GAPMVI G +TTG++
Sbjct: 364 RFLQQWNSYIRITGESGLRTRKLTQGLISWGMSVQSLVYAAVIMFGAPMVIEGSMTTGAV 423

Query: 432 VAASMLSSRMMAPLAQLTHVLTRWQQAKVALQGLDKLMQSPVDHPEGEARVHLPAIHGEY 491
           VAASML SRM+AP+A L  VL RWQQ K A  GLD +MQ P +    ++ +H   +HG Y
Sbjct: 424 VAASMLGSRMIAPMANLCGVLARWQQVKAAKMGLDNIMQLPTETQHDDSLIHRDILHGHY 483

Query: 492 RLRQANFRYSEDYPPV-LNIGRLDIQPGERIAVLGRNGAGKSTLLQALGGAMDLVQGEIS 550
               A FRY  D   + L + RL+I PGERIA+LGRNGAGKSTLLQA+ G ++++QG+  
Sbjct: 484 LFENAQFRYHNDDQRIPLRLVRLEIMPGERIAILGRNGAGKSTLLQAMAGGLEMIQGDAR 543

Query: 551 LDGIAMAHLDPADLRRDVGLLPQYARLFHGTLRENLTLGAGQASDQELVAALAATGALDF 610
           LD ++++H+D ADLRR++G L Q ARLF GTLRENLTLGA  A+D+++  AL  +G   F
Sbjct: 544 LDNLSLSHIDMADLRRNIGFLSQNARLFFGTLRENLTLGAPHANDEQIFDALEVSGGAVF 603

Query: 611 VRRLPKGMDHLILEGGLGLSGGQRQALVLSRLLVRQPQVLLLDEPTASLDDMTERKLLDN 670
           VRRL KG+DH I+EGG GLSGGQRQ+L+L+R+L+R P ++LLDEP+ASLD+ TER+ +  
Sbjct: 604 VRRLAKGLDHPIMEGGNGLSGGQRQSLLLARMLLRSPNIVLLDEPSASLDEHTEREFIQR 663

Query: 671 LERFCQGRTLVIATHRLSVLQRVDRILVLDAGRIVIDDARDAAL 714
           L ++   RTLV+ATHR+ +L+ V+R++VL  G++V+D  +  AL
Sbjct: 664 LHQWLGNRTLVVATHRVPILELVERVVVLKEGQLVMDAPKAQAL 707