Pairwise Alignments

Query, 722 a.a., Protein secretion ABC efflux system, permease and ATP-binding protein from Pseudomonas putida KT2440

Subject, 717 a.a., ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  188 bits (478), Expect = 7e-52
 Identities = 179/695 (25%), Positives = 324/695 (46%), Gaps = 44/695 (6%)

Query: 33  MLQVAHHYRLDVSPQRIRLAAAEDARPLNEI-LRHMARQAGLALRFVHFDAKGLRQWRTP 91
           +  +A +Y+L +   +IR  A+ D +  N + L   A + G + + V    + L Q   P
Sbjct: 18  LASIASNYKLKIPISKIRQLASTDQKGTNVLGLIEAAGKLGFSTKGVRGSFESLFQVPKP 77

Query: 92  ----LVLELDDGQLAVVESVTEEDDLAVVFAGDQGLTSRLPRDTLKGRISRV-ALLRPAR 146
               +VL        V+  VT+      V    +G   +L  D  K   + V  LL P  
Sbjct: 78  AIVHVVLNKTLHHYMVIYKVTKR--YVKVMDPAEGRMKKLSHDEFKDIWTGVMVLLMPNE 135

Query: 147 PLRDVRTDDYTAPYDRHWFARIVLRDLRPYGQVMIASL----VANVLALAGVLFSMQVYD 202
             + +  ++  +   R W+       + P+  VM+ ++    +  VL L+  ++  ++ D
Sbjct: 136 EFKAM--NETVSVAKRFWYL------ISPHKSVMLQAVFGAGIYTVLGLSTSIYVQKIID 187

Query: 203 RVIPAESLPTLYVLFGGVVLALVFDFSMRLLRLKVTDLLGKRADLRVSDLVYGHALRL-R 261
            V  + +   L ++   ++L L+F   + + +       G++ D R+    Y H L L +
Sbjct: 188 NVFISRNTNLLNLMSVVMILLLLFQIFIGVYKSIFVIKTGQKIDARLILGYYKHLLSLPQ 247

Query: 262 NSVRPKSTGSFISQLRELESIRDLITSSTATVLADL-----PFFLLFLFVFWLIGGVLVF 316
                   G  IS++ +   IR  I   + +++ ++      F L+F F +W +  +++ 
Sbjct: 248 RFFDTMRVGEIISRINDAVKIRAFINDVSISIVVNVFIVFFSFALMFTF-YWKLALIMLM 306

Query: 317 IPLVALLAMVLPGLLAQRRLARLANASMRESALRNAMLVESIQGLDEIKALQAE--ARFE 374
           I  + L+  V+   L +R   RL    M  +A   + LVESI  +  IK   AE  A  +
Sbjct: 307 IVPLYLVVYVVTNHLNRRVERRL----MENTAELESQLVESIHSVRTIKQFGAEDYANIK 362

Query: 375 RQWNQYNAACAHTNLRLRTLTNGLVTWTQNVQGAVFAVVIV-IGAPMVIAGDLTTGSLVA 433
            +    N      ++    L N   + +      +F ++++ IGA  V+  ++T G L++
Sbjct: 363 TEGKFINML---GSIYRSGLNNVFSSNSSEFISRLFTILLLWIGAGYVLENEITPGELLS 419

Query: 434 ASMLSSRMMAPLAQLTHVLTRWQQAKVALQGLDKLMQSPVDHPEGEARVHLPAIHGEYRL 493
              L   +  PL  +  +    Q A +A   L ++M   V+  + +  +    I G+   
Sbjct: 420 FYALIGYLTGPLVGIIGMNKTMQNAVIAADRLFEIMDLEVEEKKEKFEIKREDI-GDIAF 478

Query: 494 RQANFRYSEDYPPVLNIGRLDIQPGERIAVLGRNGAGKSTLLQALGGAMDLVQGEISLDG 553
           +Q  FRY      V +   L    G+   V+G +G+GKSTL   L     L  G+I +  
Sbjct: 479 QQVVFRYGSR-AKVFDGLNLTFPKGKVTGVVGESGSGKSTLAALLQHFYSLEAGQIKIGI 537

Query: 554 IAMAHLDPADLRRDVGLLPQYARLFHGTLRENLTLGAGQASDQELVAALAATGALDFVRR 613
             +++++ + LRR VG++PQ   LF G L +N+  G  Q + Q++V      G +DF+  
Sbjct: 538 HDISYIEHSCLRRIVGVVPQQVDLFAGNLIDNIAFGDHQPNIQKIVGICHELGMMDFIEG 597

Query: 614 LPKGMDHLILEGGLGLSGGQRQALVLSRLLVRQPQVLLLDEPTASLDDMTE---RKLLDN 670
           LP G    + E G  LSGGQRQ + ++R L R P+++++DE  ASLD  +E   ++++  
Sbjct: 598 LPNGFATFLGEHGASLSGGQRQRVAIARALYRDPEIIVMDEANASLDPKSEEYVQRVIRT 657

Query: 671 LERFCQGRTLVIATHRLSVLQRVDRILVLDAGRIV 705
           L +  +G+T++  THRLS ++  DRILVL+ G +V
Sbjct: 658 LVK--KGKTVIFITHRLSAVRDFDRILVLEKGELV 690