Pairwise Alignments

Query, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 415 a.a., transporter from Pseudomonas simiae WCS417

 Score = 62.4 bits (150), Expect = 2e-14
 Identities = 78/294 (26%), Positives = 125/294 (42%), Gaps = 55/294 (18%)

Query: 53  GKVIPSSREQVIQSFEGGIVAQMSVAEGDLVERGQVLAQLDPTKTASSVGESEAKYRAAR 112
           GK+ P +   +   F+G + A + V +G  VE GQVL ++DP          E + R A 
Sbjct: 54  GKIEPDTTITLTAPFDGNVQANL-VEQGQRVEAGQVLLRMDPATL-------EVQLRDAL 105

Query: 113 ASQARLQAEVTGKPLTFPESLRDSPDLIDAETALYQTRRRGLEQTLAGIQDSLQLVRSEL 172
           ++Q + +  V        +   + P +  A  +L     R +E T    Q        +L
Sbjct: 106 SAQLKARRTVQEM-----QDWDNGPTVTRARRSL-----RTVEMTAGNTQ-------RKL 148

Query: 173 KITENLAKMGASSRVEVIRLNRQ-----------RSELELKANEARSDYLVRAREELAKA 221
             +ENL K G   R E+  L +Q           RSEL+   ++ + +Y   A  EL  A
Sbjct: 149 TESENLFKRGIIPRNELDDLKQQTQQQQLDLASARSELQQAIDQGKGEYRQIADMELTNA 208

Query: 222 SAEADALSEVIRGRSDSLTRLTLRSPVRGIVKDIEVNT---LGG----VVQPG-----GQ 269
           + + DAL +++ G+        +++P  GIV     N     GG     VQ G     GQ
Sbjct: 209 TVKYDALHKLLEGKE-------VKAPFSGIVVPPPGNNSPQAGGNNTAPVQAGSKVSQGQ 261

Query: 270 VMKIVPMDERLLIETRIAPRDIAFIHPDQAAKVKISAYDYSVYGGLDGKVVGIS 323
           V+  +   ERL I  +++  DI  +H  QA +V    +D     G    V G++
Sbjct: 262 VLFGLANIERLKIVAKVSELDINQLHQGQAVEVLGDGFDGERLTGSVSVVSGLA 315