Pairwise Alignments

Query, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 433 a.a., hemolysin D from Pseudomonas simiae WCS417

 Score =  135 bits (339), Expect = 3e-36
 Identities = 112/422 (26%), Positives = 195/422 (46%), Gaps = 54/422 (12%)

Query: 21  RAGRIITLCALMLAAFLAWAAWFEVTEVSTGTGKVIPSSREQVIQSFEGGIVAQMSVAEG 80
           R G ++T+       F  WA+   + +     G V+ S + + +Q+   G+V+++ V EG
Sbjct: 16  RMGWLLTVVGA--GGFFLWASLAPLDQGIPVQGTVVVSGKRKAVQTLSPGVVSRILVKEG 73

Query: 81  DLVERGQVLAQLDPTKTASSVGESEAKYRAARASQARLQAEVTGK-PLTFPESLRDSPD- 138
           + V++GQ L +LD T+  + V   +A+YR A AS AR Q+E   +  + FP  L  +PD 
Sbjct: 74  ERVKQGQPLFRLDQTQHQADVQSLQAQYRMAWASVARWQSERDNRASILFPPELSANPDP 133

Query: 139 ----LIDAETALYQTRRRGLEQTLAGIQDSL---------------------QLVRSELK 173
               +++ +  L+ +RR    +  AGI+ ++                     Q +R +L 
Sbjct: 134 ALALVLEGQRQLFSSRREAFAREQAGIRANIDGATAQLNGMRRARSDLTAQAQSLRDQLS 193

Query: 174 ITENLAKMGASSRVEVIRLNRQRSELE---------------------LKANEARSDYLV 212
             + LA  G   R  ++   RQ S+++                     LK  +   +Y  
Sbjct: 194 NLQPLADNGYIPRNRLMDYQRQLSQVQQDLAQNTGESGRVEQGILESRLKLQQHSEEYQK 253

Query: 213 RAREELAKASAEADALSEVIRGRSDSLTRLTLRSPVRGIVKDIEVNTLGGVVQPGGQVMK 272
             R +LA +   +  L + +      L    + +P  GI  ++ V+T G VV+ G  +++
Sbjct: 254 EVRSQLADSQLRSLTLEQQLTSAGFDLQHSEINAPADGIAVNLSVHTEGAVVRAGETLLE 313

Query: 273 IVPMDERLLIETRIAPRDIAFIHPDQAAKVKISAYDYSVYGGLDGKVVGISPDTLQDEVK 332
           IVP D RL +E  +    +  +       +  +A++ S    + G+V  IS D + DE K
Sbjct: 314 IVPQDTRLEVEGHLPVHLVDKVGTHLPVDILFTAFNQSRTPRVPGEVSLISADQMLDE-K 372

Query: 333 PEIYYYRVFIRTEQDSLQNKAGKRFAIVPGMIATVDIRTGEKTILDYLIKP-LNRAKEAL 391
               YY +     + +L+   G    I PGM A + +RTGE+++L+YL KP L+RA  AL
Sbjct: 373 TGAPYYVLRTTVSEAALEKLHG--LVIKPGMPAEMFVRTGERSLLNYLFKPLLDRAGSAL 430

Query: 392 RE 393
            E
Sbjct: 431 TE 432