Pairwise Alignments

Query, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 438 a.a., Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC from Variovorax sp. SCN45

 Score =  186 bits (471), Expect = 1e-51
 Identities = 131/396 (33%), Positives = 200/396 (50%), Gaps = 48/396 (12%)

Query: 43  FEVTEVSTGTGKVIPSSREQVIQSFEGGIVAQMSVAEGDLVERGQVLAQLDPTKTASSVG 102
           F +  V    G+VIPS R + IQ  EGGIV+ + V EGD V+ GQ L ++D   +  ++ 
Sbjct: 45  FPMETVVVAPGRVIPSDRVKSIQHLEGGIVSSVLVKEGDKVKTGQPLVEIDLGGSGLNLE 104

Query: 103 ESEAKYRAARASQARLQAEVTGKPLTFPESLRDSPD-LIDAETALYQTRR---------- 151
           E  A+Y A +A++ RL AE  G+PL      +D  + + + ET  YQ R           
Sbjct: 105 ELTARYAATQATRVRLMAESRGQPLRRESFAKDIDEGVFEGETGAYQARALEQRGVMAGA 164

Query: 152 -RGLEQT----------LAGIQDSLQLVRSELKITENLAKMGASSRVEVIRLNRQ----R 196
             GLEQ           + G+ D L+L++ EL+I+E L       +VEV+   RQ    R
Sbjct: 165 VSGLEQARSKKLEQQAKVKGLGDRLELMQKELEISEQLLSEKLVGQVEVLEKRRQAESVR 224

Query: 197 SEL-----------------ELKANEARSDYLVRAREELAKASAEADALSEVIRGRSDSL 239
           SEL                 + K  EA   Y  RA +ELA    +  +LSE +       
Sbjct: 225 SELAVARQGVVSADAAITEAQAKMAEAEGRYRRRASDELATVERQFASLSEDLARARTQR 284

Query: 240 TRLTLRSPVRGIVKDIEVNTLGGVVQPGGQVMKIVPMDERLLIETRIAPRDIAFIHPDQA 299
           +R  +++P  GIVK +  ++ G VV+PG  ++++VP ++ +++E R+ P D  FI   Q 
Sbjct: 285 SRTVVKAPSDGIVKGLRNSSPGWVVKPGESILEVVPDEDEIMVEARLNPNDRGFIEVGQT 344

Query: 300 AKVKISAYDYSVYGGLDGKVVGISPDTLQD-EVKPEIYYYRVFIRTEQDSLQNKAGKRFA 358
           A+VKI+AYDY  YG +DGKV  ++ D  +D  +     YYR+ I   Q  +     +   
Sbjct: 345 ARVKITAYDYLRYGAVDGKVKLVAADADRDPAISNGAPYYRLLISMSQSHVGRDENR--- 401

Query: 359 IVPGMIATVDIRTGEKTILDYLIKP-LNRAKEALRE 393
           I  GM + VD+R G    + Y+++P L   +EA RE
Sbjct: 402 ITAGMESEVDLRVGTDPFIWYILRPVLKLRREAFRE 437