Pairwise Alignments

Query, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 397 a.a., multidrug efflux transport system - membrane fusion protein from Pseudomonas putida KT2440

 Score = 57.4 bits (137), Expect = 7e-13
 Identities = 88/345 (25%), Positives = 129/345 (37%), Gaps = 69/345 (20%)

Query: 28  LCALMLAAFLAWA------AWFEVTEVSTGTGKVIPSSREQVIQSFEGGIVAQMSVAEGD 81
           L  L+LA    WA       W E T+ +   G V+       I     G V  +   +GD
Sbjct: 28  LLLLILAGVGTWAWYSIVGRWHESTDDAYVNGNVVE------ITPLVAGTVTSIGADDGD 81

Query: 82  LVERGQVLAQLDPTKTASSVGESEAKYRAARASQARLQAEVTGKPLTFPESLRDSPDLID 141
           LV  GQVL Q DP        +SE   ++A A  AR   +V G               +D
Sbjct: 82  LVHAGQVLLQFDP-------ADSEVALQSAEAKLARSVRQVRGLYSN-----------VD 123

Query: 142 AETALYQTRRRGLEQTLAGIQDSLQLVRSELKITENLAKMGASSRVEVIRLNRQRSELEL 201
           +  A  +TR+  L +          L  S     E L+       V    +N  R +L  
Sbjct: 124 SLKAQLETRQAELRKAQQDFNRRKVLADSGAIAAEELSHARDDLSVAQAAVNSARQQLS- 182

Query: 202 KANEARSDYLVRAREELAKASAEADALSEVIRGRSDSLTRLTLRSPVRGIVKDIEVNTLG 261
            ++    D +V +  ++  A+A+       +R       R TL +PV G V    V  LG
Sbjct: 183 TSSALVDDTVVSSHPDVMAAAAD-------LRQAYLDHARTTLVAPVTGYVAKRTVQ-LG 234

Query: 262 GVVQPGGQVMKIVPMDERLLIETRIAPRDIAFIHPDQAAKVKISAYDYSVYGGLDGKVVG 321
             +QPG   M ++P+D+  +          A     Q  +++I            G+ V 
Sbjct: 235 QRLQPGTATMAVIPLDQVWI---------DANFKETQLREMRI------------GQPVE 273

Query: 322 ISPDTLQDEVKPEIYYYRVFIRTEQDSLQNKAGKRFAIVPGMIAT 366
           I+ D    EVK   Y   V      DSL    G  FA++P   AT
Sbjct: 274 ITADVYGSEVK---YSGTV------DSLGAGTGSAFALLPAQNAT 309