Pairwise Alignments

Query, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 458 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

 Score =  281 bits (718), Expect = 3e-80
 Identities = 166/408 (40%), Positives = 238/408 (58%), Gaps = 46/408 (11%)

Query: 31  LMLAAFLAWAAWFEVTEVSTGTGKVIPSSREQVIQSFEGGIVAQMSVAEGDLVERGQVLA 90
           L     + WA+   + EV+ G GK IPSS+ Q IQ+ EGGIVA++   EG +VE GQ L 
Sbjct: 53  LFFVFLIVWASVAPIDEVTRGEGKAIPSSKVQKIQNLEGGIVAEIFAKEGQIVEVGQPLL 112

Query: 91  QLDPTKTASSVGESEAKYRAARASQARLQAEVTGKPLTFPESLRDS-PDLIDAETALYQT 149
           +LD T+ AS+VGE+EA   A      RL AEV  +PL   E LR + P+   +E +LYQ+
Sbjct: 113 RLDETRFASNVGETEADRLAMALRVERLSAEVEDRPLIIDEKLRKAAPNQAASEESLYQS 172

Query: 150 RRRGLEQTLAGIQ---------------------DSLQLVRSELKITENLAKMGASSRVE 188
           RR+ L+  + G+Q                     +SL+L+R E+ ++E L   GA S+VE
Sbjct: 173 RRQQLQDEIGGLQQQLVQRQQELREYSSKRTQYANSLELLRKEISMSEPLVATGAISQVE 232

Query: 189 VIRLNRQR---------------------SELELKANEARSDYLVRAREELAKASAEADA 227
           V+RL R                        E++ K  E R  +   A  +L +A  E + 
Sbjct: 233 VLRLRRAEVENRGQLDSTALAIPRAEAAIREVQSKIEETRGKFRSEALTQLNEARTELNK 292

Query: 228 LSEVIRGRSDSLTRLTLRSPVRGIVKDIEVNTLGGVVQPGGQVMKIVPMDERLLIETRIA 287
            +   +   D + R  + SPVRGIVK + VNT+GGV+QPG  ++++VP+D+ L+IE +I 
Sbjct: 293 ATATSKALDDRVHRTLVTSPVRGIVKQLLVNTIGGVIQPGSDIIEVVPLDDTLVIEAKIL 352

Query: 288 PRDIAFIHPDQAAKVKISAYDYSVYGGLDGKVVGISPDTLQDEVKPEIYYYRVFIRTEQD 347
           P+DIAF+HP Q A VK +AYDY++YGGL  K+  I  DT+ DE K +  YY + +RT++ 
Sbjct: 353 PKDIAFLHPGQEATVKFTAYDYTIYGGLKAKLEQIGADTITDEDK-KTTYYLIKLRTDRS 411

Query: 348 SLQNKAGKRFAIVPGMIATVDIRTGEKTILDYLIKPLNRAK-EALRER 394
            L     K   I+PGM+ATVDI TG+KTI+ YL+KP+ +A+ EALRER
Sbjct: 412 HLGTDE-KPLLIIPGMVATVDIMTGKKTIMSYLLKPIMKARSEALRER 458